Lotus japonicus: 130720020
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Entry
130720020 CDS
T04348
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
lja
Lotus japonicus
Pathway
lja03083
Polycomb repressive complex
lja04120
Ubiquitin mediated proteolysis
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130720020
04120 Ubiquitin mediated proteolysis
130720020
09126 Chromosome
03083 Polycomb repressive complex
130720020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130720020
04121 Ubiquitin system [BR:
lja04121
]
130720020
03036 Chromosome and associated proteins [BR:
lja03036
]
130720020
Membrane trafficking [BR:
lja04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
130720020
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
130720020
Cul7 complex
130720020
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130720020
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
130720020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
BTB
Motif
Other DBs
NCBI-GeneID:
130720020
NCBI-ProteinID:
XP_057426587
LinkDB
All DBs
Position
5:66438109..66438777
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AA seq
156 aa
AA seq
DB search
MASSSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKI
NEYVKKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIA
GKTPEQIRQTFNIKNDFTREEEEEVKEEFAWAFEKK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcgtcttcaacgaaagtgatcttgatgtgttatggaggggaggttatggag
gtgcatgaggctttggtgaatgcatctccaactctgaagagcttgatacgagaaaagggt
gttgatggtgacaacaagatcaacttgccaaacatctctattgaaactatgtgcaagatc
aatgagtatgtgaaaaagcatgcagaggctgttgatcctgcaaaaaatcttgatgcctgg
gatgaagagtttattaaggttggcttagacactctctatgacctactccaggcatcatgt
tacctgaaaattcaaaaccttaatgatttgggatgtaagactgtagccaacataatagcg
ggaaagaccccagaacaaattcgccaaactttcaatatcaagaatgattttacccgagag
gaagaagaggaggtgaaagaagagttcgcatgggcctttgaaaagaaataa
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integrated database retrieval system