Lotus japonicus: 130720083
Help
Entry
130720083 CDS
T04348
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130720083
Membrane trafficking [BR:
lja04131
]
Autophagy
Other autophagy associated proteins
Others
130720083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_IFT140_2nd
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
130720083
NCBI-ProteinID:
XP_057426669
LinkDB
All DBs
Position
5:complement(56086091..56089653)
Genome browser
AA seq
360 aa
AA seq
DB search
MQPQSPSLLRLSFNQNNTCFAAASATGFQVFRINPFTELFRRDFSGSGIGHVEMLFHSNI
LALVGGGSRPQFPPNKVMLWDDNKGRCFGELSFRSAVRSIRLRRDRIVVVVELKVFVYNI
ADFKLLHQVETVVNPKGLCAVSQSAESLVLACPGLHKGQVRVDHLAAAQKRRTIFVSAHD
SALACLALTLDGKFLATASSKGTLIRVFDSAKGTLLQEVRRGANEADIYSLSFSSTAQWL
GVSSDKGTIHIFSLKVDSSEKNCDKSQSSSDSGASITPSRSYFSLIKKGVLPKYFNSEWS
FAQFHLHGSSHYTVAFDDQKNTIIILGMDGSLYRCQFDPVHGGEMTQLDYHNFLKPEIAS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgcaatccccgtcgctcctccgcctctccttcaaccaaaacaacacctgcttt
gccgccgcctccgccaccggcttccaagtcttccgcattaatccattcactgagctattc
cggcgagacttctccggcagcggaatcggccacgtcgagatgctcttccactccaacata
ctcgccctcgtcggcggcggctcccgccctcagttccctcccaacaaagtcatgctctgg
gacgacaacaagggcaggtgcttcggcgagctctcgttccgttccgccgttcgctccatc
cgtctccgccgcgatcggattgtggtggtagttgagttgaaggtcttcgtttacaacatc
gccgatttcaaattgcttcatcaggttgagaccgttgtgaaccctaaggggctttgcgcg
gtttcgcagtcagctgaatcgttggttctagcgtgccctggcttgcacaagggtcaggta
agggtggatcacttggcggcggcgcagaagaggaggactattttcgtttcggctcatgat
tcggcgttagcgtgcctagctctcacgcttgatggcaagtttctcgctaccgccagctca
aagggcacgctcattcgggttttcgattcggcaaaggggactctccttcaggaagtaaga
aggggcgcaaatgaagcagatatctacagtttgtcattctcttctactgctcagtggtta
ggagtttctagtgacaagggtaccatccatattttcagccttaaggttgattctagtgaa
aagaattgtgacaagtcacaaagttcatccgattctggtgcttccattacaccatccaga
tcatatttctcattgattaaaaaaggagtgttgccaaagtatttcaattcagagtggtca
tttgctcagtttcacttgcatgggagctctcattacactgttgcatttgatgaccaaaag
aataccatcataattcttggcatggatggaagcttgtatcgatgtcagtttgatccggtg
catggtggagagatgactcagcttgattatcataactttctaaaaccagaaatagcctcc
tga
DBGET
integrated database retrieval system
