Lotus japonicus: 130720107
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Entry
130720107 CDS
T04348
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130720107
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130720107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR5
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_HPS5
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SCAP
Cytochrom_D1
WD40_RFWD3
SxtJ
Motif
Other DBs
NCBI-GeneID:
130720107
NCBI-ProteinID:
XP_057426703
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Position
5:57410268..57416492
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AA seq
530 aa
AA seq
DB search
MGDTDSLPPPTEQEISNELDLRVKKYLRGEGANLEGLKDKKLKTQLTNREKLYDKSAKAA
AMAEKWLMPSEGGYLEADGVENTWRIKQETIASEVDILSSRNQYDIVLPELGPYTLDFTS
SGRYMAVGGRKGHLGIVDMMSLNLIKEFQVRETVRDVAFLHNELFFAAAQKKYPYIYNRE
GVELHCLKEHGSVLRLQFLENHFLLATVNKFGQLRYQDVTMGTMVGNCRTGSGRTNVMQV
NPFNAVVSLGHSSGTVTMWKPTSSSPLVKMLCHRGPVTALAFHSNGHLMATAGQDKKIKL
WDLRKFEALQTLPGHANTMDFSQKGLLACGTGSFTQVLRDVSGTQKYSKYMMHSMAKGYQ
VGRLVFRPYEDVLAIGHSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEVRSLLDKL
PPETIMLDPRKIGSVKLTKREKPSMQEKEAEMEAAVEAVKSKKLKKKTKGRNKPGKVAHK
KQEAIGRAKRPFVEQKIQEEENISKKKQKTTEGVELPVSLQRFARKKPSS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaccgattctcttcctcctcccactgaacaagaaatttccaatgagctagac
ctgagagtaaagaagtacctcagaggagaaggtgctaatttggagggtttgaaggataaa
aagctcaagacccaacttactaatagagagaaattgtatgacaaatctgctaaagctgct
gccatggctgaaaagtggcttatgccaagtgaaggaggttatctggaggctgatggtgtg
gagaatacatggaggatcaaacaggagacaatagcttctgaagtagatatcttaagctca
aggaatcaatatgatattgttttaccagaacttggtccatatactctggattttacatca
agtggtcggtatatggctgttggtgggcgtaagggccatctgggaattgtggacatgatg
agtctgaacctaatcaaagagtttcaggtgagagaaaccgtgcgtgatgtggcatttttg
cataatgagctattttttgccgctgcccagaaaaagtacccgtacatctataatcgtgaa
ggtgttgagcttcactgcctcaaggaacatggttcagtgttaaggcttcagtttctggaa
aaccattttctcctggctactgtcaacaaatttgggcagcttcgctatcaggatgttacg
atgggtactatggttggtaattgtcgaactggctcaggacgtacaaacgtgatgcaagta
aaccctttcaatgcggttgtttctttaggtcactctagcggtacagtcactatgtggaag
ccgactagttcttctcctcttgtcaagatgctatgtcatcgcgggcctgtcacagcactg
gcatttcactcaaatggccacttaatggccactgctgggcaagataaaaaaatcaagctt
tgggatttgaggaagtttgaggctcttcaaacgttaccaggccatgcaaatactatggat
ttcagtcaaaaaggcttgcttgcttgcggtactggttcatttacccaggttctgagggat
gtttccggtacacagaagtactctaagtacatgatgcattccatggcgaagggttaccag
gtaggaagattagtttttcgaccatatgaagatgttctagccatagggcattcaatgggg
tggtcaagtattcttattccaggagcaggggaacccaacttcgattcatgggttgcgaac
ccgtttgaaacgtcgaaacagaggagagaaaaggaagtgcggtctcttcttgataagctt
ccaccagagacaatcatgttggatcccaggaaaattgggtcggtgaaactgacaaaaaga
gagaagccaagcatgcaggagaaggaggctgagatggaagctgctgttgaagctgttaag
agcaagaaactgaagaagaaaacaaaaggaagaaataagcctggtaaagtggctcacaaa
aagcaagaggcaattggtagagcgaaaagacctttcgtggagcagaaaattcaggaggag
gaaaacatatcaaaaaagaaacagaaaactactgagggagttgaattgccagtatcttta
cagcggtttgctcgtaaaaaaccatcatcataa
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