Lotus japonicus: 130720137
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Entry
130720137 CDS
T04348
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lja01002
]
130720137
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130720137
Enzymes [BR:
lja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130720137
Peptidases and inhibitors [BR:
lja01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130720137
Ubiquitin system [BR:
lja04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130720137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
130720137
NCBI-ProteinID:
XP_057426735
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All DBs
Position
5:complement(8386064..8391529)
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AA seq
719 aa
AA seq
DB search
MLVVASVSWDLNWFLQLILYALVICVGLHVLVKNTASKYFEGEHHSPSASMPGVLAADNA
VCTVCSAHATRRCSRCKAVRYCSTECQQSHWKSGHNVKCKYSQEATGALNSAQNGVTNRG
GFKASRGKRSGIALVPGFGTSSSRPIKQPKDALFPYKEFVKFFNWDKPGFPPCGLLNCGN
SCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERTRQSSQAFSPMNI
LSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKLQETTLIQHIFGG
HLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCK
GYVKAWKRLTVKCAPNILTIALKRFQSGKFGKLNKRVAFPETLNLSPYMSDAGDGSDIYK
LYAVVVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCS
ARRSSLQIQTNESSGIAEMHTMDMKPCKIDQAECLSSKTLTCSQGCAFVASDTSSELKVS
SDCEFESSTGLNSEGESQPSEVIDTNTINIKSADTANEISCSAVESSYMPIFQIVQDLGD
VDMGRSLEETSGGTQEEDDAAMARSGPSLGLSNDFSFLDKDSSVLTDSQNVEDSELRDVN
KCRSLTATDNAYNGTGHVSENKSAIPLEESGTLISSFGSFLTESDKGNGINKVEISADK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttgtggccagtgtatcgtgggatctgaattggttcctgcaattgatactgtac
gctcttgttatctgcgttggattgcacgttttggtcaagaacactgcttccaagtacttt
gaaggcgaacaccactctccctccgcctcaatgcccggcgttcttgccgccgataacgct
gtctgcaccgtctgctccgcccacgccacccggagatgctcccgctgcaaagccgtccga
tactgctcaacggaatgccaacagtcgcattggaagtctgggcataatgtaaaatgcaaa
tattctcaagaagctactggtgctttgaactcggctcaaaatggggttactaatcgcggc
gggtttaaggcttccaggggtaaaagatcgggaatcgcattggtacctggttttggaact
tctagctccaggccaatcaagcagcctaaagatgctctttttccttacaaagaatttgtg
aaattttttaattgggacaagccaggatttcccccttgtggactcttgaattgtggaaac
agttgctttgcaaatgtggttctccagtgtctctcattcacaaggccacttattgcctac
ttgttggagaagggccaccgaagagaatgcagttgtaatgattggtgctttctatgtgaa
tttgaaagtcacgttgaaagaaccaggcaaagttcacaggcattttctccaatgaatatt
ctctctcgtttgcctaatattggtggtactctgggttatggaagacaggaggatgctcat
gagtttatgagattttcaattgatactatgcaatctgtttgcctagaggaatttggtgga
gaaaaagctgtccctcctaaacttcaggaaacaacccttattcaacatatttttggtggc
caccttcaatctgaggtcatttgcacaaagtgtgataagatttcaaatcagtatgaaaat
atgatggacttgactgttgaaattcatggagatgctgcctcgttggaggaatgtctagac
cagtttactgtcaaagagtggcttgatggggacaacaagtataaatgtgacgggtgcaag
ggctatgtcaaggcatggaaacgcctcactgtgaaatgtgctccaaatattcttaccatc
gccttgaaaagatttcagagtgggaagtttggaaaacttaacaagagagtagccttccct
gagactttaaatcttagcccctacatgagtgatgctggagatggatctgatatatataaa
ttatatgctgttgtagtccatattgatatgctaaatgcttcattttttggtcactacatc
tgctacatcaaggacttcatgggaaattggtacaggattgatgattcaaaggttagaagt
gtggatttggaggaggtgctttctcagggagcgtacatgctgttgtatagcaggtgtagt
gcccggcgatcaagcctacaaattcaaactaatgagtcttcagggatagcagaaatgcat
acaatggacatgaagccttgcaaaattgatcaagctgaatgcctctcaagtaagactttg
acctgcagtcaaggttgtgcgtttgttgcatctgatactagttcagaattgaaggtttct
tctgactgtgaattcgagtcttccactggattgaactcagaaggcgaaagccagccctct
gaggttattgacactaacactattaatattaagtcagctgacactgcaaatgagatttct
tgtagtgctgttgaatcgtcttatatgcctatttttcaaattgtccaagatttgggggat
gtagatatggggagatctttagaagagacttcaggcggcacacaagaggaagatgatgct
gctatggctaggtctggtccttctctgggtttatcaaatgacttctctttcttggataag
gattcttctgttttgactgattctcaaaatgtggaagattcagaactaagagatgtgaat
aaatgcaggtcattaactgctacggataatgcatataatggcactggacatgtcagtgaa
aataaatcagctattccacttgaagagtctggtacactaatttcgagttttggttctttt
ctcactgaaagtgacaaaggaaatggaattaataaagtggaaatatcggcagacaagtaa
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