Lotus japonicus: 130720516
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Entry
130720516 CDS
T04348
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130720516
Membrane trafficking [BR:
lja04131
]
Autophagy
Other autophagy associated proteins
Others
130720516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RSE1_2nd
Beta-prop_IFT122_2nd
PEP5_VPS11_N
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
130720516
NCBI-ProteinID:
XP_057427146
LinkDB
All DBs
Position
5:52961672..52964705
Genome browser
AA seq
395 aa
AA seq
DB search
MSHTPQTLIPVDSDESSPDSPPPPPATQTPNPPSSTSTTPSTLLHLSFNQDSGCFAAATD
QGFRIYNCDPFREIFRREFGPGGGIGLVHMLFRCNILAFVGGGGGGSDPRYPPNKVMIWD
DHQSRCIGELSFRSEVKGVRLRRDRIVVVLGHKIFVYNFADLKVMHQIETITNPKGLCEV
SHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIAAFALTQDGRLLATASSKGTL
LRIFNTLDGTLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFNLKVDSGLLGHD
RSHSTSESSPSSPTAGSSLSFIKGVLPKYFSSEWSVAKFHLQEGLQYVVAFGHQKNTIVI
LGMDGSFYRCQFDSATGGEMTQLEYYNFLKPEETF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaccccacaaaccctaatccccgttgattccgacgaatcatcacccgattca
cctcctcctcctccggcgacccagacacccaacccgccgtcctccacttccaccaccccc
tccaccctcctccacctctccttcaaccaagactccggctgcttcgccgccgctaccgac
caaggcttccgcatctacaactgcgaccccttccgcgagattttccgccgcgagttcggc
cccggcggcggcatcggcctcgtccacatgctcttccgctgcaacatactcgccttcgtc
ggcggcggcggtggcggttccgacccacgttacccgccgaataaggtcatgatctgggac
gaccaccagtctcgctgcatcggggagctctcgtttcgatcggaggttaaaggggttcgt
ctccggcgagaccgaatcgtggtggttctcggtcacaagatattcgtgtacaattttgcg
gatcttaaggttatgcatcagattgagaccattacgaacccgaaggggctctgtgaggtt
tctcatgtttcggggacgatggtgttggtgtgtccagggttgcagaagggtcaggttagg
gtggagcattatgcttccaagagaactaagttcatcatggctcatgattccagaatcgcc
gcgttcgctctcactcaggatggccggttgctcgccaccgcgagctctaaggggaccctc
cttaggattttcaataccttggatggtactttgctccaagaggtaaggagaggtgctgac
cgagcagagatatacagccttgccttttcttctactgcacagtggcttgctgtctcgagt
gacaagggaaccgttcatgtgtttaacctgaaagttgattccggactattggggcatgat
agatcacatagtacatctgagtctagtccttctagcccaacggcgggttcatctctttca
tttattaaaggtgtgttgccgaagtatttcagctcagagtggtctgtggctaaatttcac
ttgcaagaaggtttgcaatatgttgttgcttttggccatcaaaagaacacaattgtaata
cttggcatggatggcagcttctatcgatgtcagtttgattctgcaaccggtggagagatg
acccaactcgaatattacaatttcctaaagccagaggagacattctag
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