Lotus japonicus: 130720584
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Entry
130720584 CDS
T04348
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130720584
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130720584
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130720584
NCBI-ProteinID:
XP_057427220
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Position
5:complement(11679600..11682361)
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AA seq
380 aa
AA seq
DB search
MGNTHRKHRANSAPHNTVPPPYKYGTTHSPIIPTQNQPSTSNSNNNSNMLSLPYAHVDST
LRALAANAEGFGRCAVGGLHGALYHVTSLADDGPGSLRDGCRRKEPLWIVFEVSGTINLS
SYLSVSSYKTIDGRGKRIKLTGKGLRLKDCQHVIICNLELEGGRGSDVDGIQIKPNSQHI
WIDRCSLSDFDDGLIDITRESTDITISRCHFSRHDKTILIGADPSHVGDRCMRVTIHHCF
FNGTRQRHPRVRYAKVHLYNNYTRDWGIYAVCASVESQIFSQHNIYEAGHKKVAFKYLHE
KAADKEAEATGYIRSEGDLFLNGAQPGLLTQNVECNMFHPSEYYPTWTVEPPKDDLKQVL
HHYTGWQSVARPADQTVCAD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacccaccgcaaacaccgtgctaattccgccccacacaacaccgttcctccg
ccttataaatatggcacaactcactcaccgatcatcccaacccaaaaccaaccttctact
tccaattccaacaacaacagcaacatgctctctttgccttacgcccacgtcgactccact
ctccgcgccctcgccgccaacgccgagggattcggccgctgcgccgttggtggacttcac
ggtgctctttatcatgtcacctctcttgcagatgatggacctggatcactacgtgacggt
tgtcggagaaaagaacctttgtggattgtgtttgaggtttctggcactattaatctttcg
tcgtacttgagcgtgtcgtcgtacaagaccattgatgggaggggcaagaggattaagctc
acgggaaaaggtttgaggctgaaggactgccagcatgtgatcatttgcaatttggagtta
gaaggaggaagagggtctgatgttgatggcattcagataaagcctaattcacagcacata
tggatagaccgttgcagtctcagtgattttgatgatgggctcatagatattacaagagaa
agcacagatataactatttcaaggtgtcatttctcgcggcatgacaaaacaatactcata
ggggcagatccctctcatgttggtgacagatgcatgagggtcaccattcaccattgtttc
tttaatgggactcgacagagacaccctcgtgttagatatgctaaagtacatctgtacaat
aattacaccagagactggggcatatatgctgtttgtgccagtgtggaatcccagatattc
tctcaacataatatctatgaggcaggccacaagaaggtggcatttaagtatcttcatgag
aaggcagcagataaggaagcagaagcaactggttatataaggtctgaaggagacttgttt
ctaaatggtgctcaaccagggttactaactcagaatgttgagtgtaacatgtttcacccc
agtgaatactatcccacatggacagtggaacctccaaaagatgatctaaaacaggttctt
catcactacactggatggcaatccgttgcgagaccagcagatcaaacagtttgcgcagac
tag
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