Lotus japonicus: 130720606
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Entry
130720606 CDS
T04348
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130720606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130720606
Spliceosome [BR:
lja03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
130720606
Complex B
130720606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
130720606
NCBI-ProteinID:
XP_057427257
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All DBs
Position
5:57046819..57049975
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AA seq
210 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQQVGVAYNHLMVPRPGGPPLLPMPQPRFPMPGNVQMPGGQPLMPGMRPLMPLPRPV
PGAPGYVPAPGGPPVLPPPGAPQVPGQLNAIPRPPSFAPPTTAPGSTAAPASNGAPSMVS
SAMYQPNPSAPSSGGYDNYNANAQAPDGNH
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtactactgtgactactgcgatacctatttgactcacgattctccatctgtt
aggaagcagcataactctggttacaaacacaaggcaaatgtgaggaactactaccagcag
tttgaagagcagcaaacgcaaagtttaattgatcagaggatcaaagagcatctcgggcaa
gctgctgcgtttcagcaggttggggtggcttataatcatctaatggttccgaggccgggt
ggtcctcctttattgccaatgccgcagccaagatttcctatgcctggaaatgtgcaaatg
cctggaggtcaaccactaatgccggggatgagacctctgatgcccttgcctagacctgtt
cctggtgcaccaggatatgttcctgcacctggtgggccgccagtgctacctccacctggt
gctccccaggtaccaggtcaactaaatgccataccgaggcccccttcattcgcacccccg
acaacagctcctggaagcactgccgctcccgcttccaatggtgctccctctatggtatca
tcagcaatgtatcaacctaatccatcagcaccatcatctggaggctatgataactacaat
gccaatgctcaagcacctgatggcaatcactga
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