Lotus japonicus: 130720738
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Entry
130720738 CDS
T04348
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130720738
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130720738
Meiosis-specific proteins
Cohesin complex and associated proteins
130720738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
TolA_bind_tri
DUF1664
Motif
Other DBs
NCBI-GeneID:
130720738
NCBI-ProteinID:
XP_057427411
LinkDB
All DBs
Position
5:complement(46287302..46299968)
Genome browser
AA seq
1216 aa
AA seq
DB search
MPSLLSPGKIHRLEMENFKSYKGFQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAFDDREKEQRGRRAFVRLVYQLANNSEIQFTRTITSAGASEYRIDGNL
VNWDIYNAKLKSLGILVKARNFLVFQGDVESIASKNPKELTGLIEQISGSDELKRDYEQF
EEEKGAAEEKSALIYQKKKTVVMERKQKKEQKEEAEKHLRLQEQLKSVKKEHFLWQLFNI
ENDITKTTEDLEDETKSRLAVIEELGNFENEASKKKKEQAKYLKEIALREKKITEKSNKL
DKSQPELLKLKEEMTRINSKIKKGKKELDKKREERRRHAADIAELQRGIQDLAAKMADLQ
EKSRGVGNELELDGDDLEEYFRIKEEAGMKTAKLREEKELLDRQQHADSEAQKNSEENLQ
QLRNRESELNSQEEQMQARLKKIVDSSAKNKDGLANLKKELRVMQDKHRDSKKKYENLKL
KIGELENQLRELKADRHENERDAKLSQAVETLKRLFQGVHGRITELCRPTQKKYNLAVTV
AMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSIRVKPIMERLRALGGTAKLVF
DVIQFDPSLEKAILFAVGNTLVCDGLDEAKDLSWKGERFKVVTVDGILLTKSGTMTGGTS
GGMEARSNKWDDKKIEGLNKKKEQYESELDELGSIRDMHLKESEASGKISGLEKKIQYAE
IEKRSIEDKLSNLNQEKETMKKQIERITPDLQKLNGTVDKRNAELRKLEKRINEITDRIY
KDFSKSVGVSNIREYEENRLKDAQNVAEERLNLSSQLSKLKYQLEYEQNRDMSSRIQELE
YSLSALENDLKRVQNKEAEAKLAAENATEEIDQFKDEVKEWRSKSEDCEKEIQEWKKKAS
LSTTNLSKLNRLINSKETQIDQLVVQKQEILEKCELEQISLPTISDSMDTGSSTPGPVFD
FDQLSRPLKDRRPSDRDKIEVEFKQKMGTLISEIERTAPNLKALDQYEALLEKERGVLEE
FEAVRKEEKEKADRFNAVKQRRYELFMDAFNHISGNIDKIYKQLTKSHTHPLGGTAYLNL
ENEDDPFLHGIKYTAMPPTKRFRDMDQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA
ALDNLNVAKVAGFIRSKSCEGRASQDTDGGSGFQSIVISLKDSFYDKAEALVGVYRDSDG
GCSKTLTFDLTNYRES
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgctactctcgccggggaaaatccaccggctagaaatggagaatttcaaatcc
tacaaaggcttccaagttatcggtcccttctacgacttcaccgccatcatcggccccaac
ggcgccggaaaatccaacctcatggacgccataagcttcgttctcggcgtcagaaccggc
cagctccgcggcgcgcaactcaaggacctcatctacgccttcgacgacagggagaaggag
cagagaggacgcagagccttcgtccgcttggtctaccagctcgctaacaactccgagatc
cagttcacccgaaccatcacctccgccggcgctagcgagtaccgcatcgacggtaacctt
gtcaactgggatatctacaacgccaagctcaaatcactcggtattcttgtcaaggctcgc
aatttcctcgtctttcagggtgatgttgaatctattgcgtcgaagaatccgaaagagcta
accggccttatcgagcagatatctggctctgacgagctcaagagggactatgagcagttt
gaagaagaaaaaggcgctgctgaggagaaatcggcgcttatttaccagaagaagaagacg
gtggttatggagaggaagcagaagaaggaacagaaggaggaggcagagaaacatctccgc
ctgcaggagcagctgaaatctgtgaagaaggaacatttcttgtggcagttgttcaatata
gaaaatgatattacgaaaacaactgaggatcttgaagatgagaccaaaagtcgtctagct
gttattgaagagctgggaaattttgaaaatgaagcaagtaaaaagaaaaaagagcaggcc
aaatatcttaaagaaattgcgctacgtgaaaagaaaattactgagaaaagcaacaaactt
gacaagagtcaacctgagcttctgaagttaaaggaggaaatgactcgtatcaattcaaaa
ataaaaaaagggaagaaggaacttgataaaaaaagggaagaacggaggaggcatgctgct
gatatagcggagctacaaagggggatccaggatcttgcagcgaaaatggcagacttacag
gaaaagagtcgaggtgttggcaatgagcttgagttagatggcgatgacttggaagaatat
tttagaatcaaagaggaagctgggatgaaaactgcaaagcttagggaggaaaaagagctt
ctagataggcagcaacatgctgatagtgaagctcaaaaaaattcggaagaaaatcttcaa
cagttacgaaacagggagtctgaattgaattcacaggaagaacagatgcaggcaaggctt
aaaaaaattgttgatagttctgcaaaaaataaggatggacttgcaaacttgaagaaagag
ctgcgtgtgatgcaggacaaacatcgtgattccaagaaaaaatatgaaaatttgaagttg
aaaatcggtgaattagaaaatcaactacgtgaactaaaggctgatagacatgaaaatgag
cgagatgctaaactatctcaggctgtggagactctgaaacgcctgtttcaaggagtccat
ggtcgcataactgaactttgtaggccaacacagaagaagtataacctagccgttactgtt
gctatgggtaaatttatggatgcagttgtagttgaggatgaaaagactgggaaggaatgc
atcaagtatttaaaagaccagaggcttcctccgcagacatttattcctctgcaatctatt
cgtgtgaagccaataatggaaagattgcgggcattagggggtacagcaaaactggttttt
gatgtgattcagtttgatccctccttggagaaggcaattctctttgctgttgggaatact
cttgtttgtgatggtcttgatgaggccaaagatttaagctggaaaggcgagagatttaaa
gttgtaactgtggatggaattctgcttacaaaatccggcacaatgactggtggcactagt
ggtggaatggaagcaaggtcaaataagtgggatgacaagaaaattgaaggacttaataaa
aagaaagagcagtatgaatcagagttagatgagctaggatcaatcagagatatgcacctt
aaagagtctgaagcatctggaaaaattagtggactggagaagaaaattcaatatgctgag
attgaaaagcgaagcattgaagacaaactttcaaatttgaaccaagaaaaagagaccatg
aaaaaacaaattgaacgtatcactccagacctccagaagttaaatggcactgttgacaaa
aggaatgcagaattgcgtaagcttgagaagagaattaatgaaatcactgatcggatatac
aaagactttagcaagtcagttggggtttcaaacatccgtgagtatgaagaaaatcgactc
aaggatgctcaaaatgtagcagaggagaggctgaacctgagtagccaactttcaaaatta
aaatatcagttggagtatgagcaaaatcgtgacatgagttcacgaattcaagaactggaa
tattctcttagtgctttagagaatgacttaaaacgggtacaaaacaaagaggctgaagca
aagttagcagctgagaatgctactgaagagattgatcagtttaaggatgaagttaaagag
tggagatcaaagtcagaggattgtgaaaaggaaatccaagaatggaagaagaaggcttct
ttatccacaacaaacttatccaaacttaatcgtctgataaactccaaggagacacagatt
gatcagttggtggtgcaaaagcaggaaatattagagaagtgtgaactggagcagattagc
cttccgaccatatcagattctatggatactggtagctccacaccaggtccagtttttgac
tttgatcagctcagtaggccactgaaagataggagaccctctgacagggataaaattgag
gtagaatttaagcaaaaaatgggtacgctaatatctgagattgaaagaacagcaccaaat
ttgaaggcattggaccagtatgaggctctgctagaaaaagaaagaggtgtattggaagag
tttgaagctgtcaggaaagaggagaaggaaaaagcggatagattcaatgctgttaaacag
aggaggtatgagttgttcatggatgctttcaaccatatatctggtaatatagataaaatt
tacaaacagcttacaaagagccacacacatcctctgggtggaacagcatacctaaatttg
gaaaatgaagatgatccatttctacatggcatcaagtacactgctatgcccccaacaaag
cgcttccgtgatatggatcagctatctggtggggaaaagactgttgctgcacttgcgttg
ctattctccatccacagctataagccgtcgccgttttttatattggatgaagttgatgct
gcattggacaacttgaatgtcgctaaggttgctggctttattcgttcaaaatcttgtgaa
ggaagggctagccaggatactgatggtggaagtggttttcaaagtattgtgatttcactg
aaagacagcttttatgacaaagctgaggcgctagttggggtctacagggattctgatgga
ggttgttcgaaaactctcacgtttgatctaactaactatcgggagtcctga
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