Lotus japonicus: 130720837
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Entry
130720837 CDS
T04348
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130720837
03036 Chromosome and associated proteins [BR:
lja03036
]
130720837
Transcription factors [BR:
lja03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130720837
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130720837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130720837
NCBI-ProteinID:
XP_057427521
LinkDB
All DBs
Position
5:complement(51319091..51347735)
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AA seq
1369 aa
AA seq
DB search
MEGKADDEVVVDIESASSGSFNDDSDDEGSLPSEIDDKVIEEPLTEQEIEDLVSELLEVE
SKAAEAQEALEEESLAKVESEVRQELKQTLQGDDLETAVADEMTTFKEDWEAVLDELETE
AAHLLEQLDGAGIELPSLYKLIEKEAPNVSCTEAWKRRNHWVGSETTAEISKSIGDAEQY
LKGNRPVRRRHGKLLEEGASGFLQKKICAEAQEPVKKEGEVDWDLFNKIISDESGGDASF
GSRQWASVYLASTPQQASLMGLKFPGVDEVEEIDDVDGNSTDPFVAAAIANERELDLSDE
QRRQFKKVKEEDDAIVDRKLQIRLKHRRHQKKSKQRERSTHTVSMESQILKPCSVDEFSP
VMKDGTSDYGELVSDNDKVACLNMETDTIGGFDASFHLDKEEPMSTCNLSDPPKSSLGDV
IEQRGTKRLNDGELDADNKKRHTGITDSDDEADATEDKLDCSTLDDQSKIKGLSGVVVSS
SGSDSESDNSDESDDSDDSDAKINVTISSKRRHKKKIRRILDDAELGEETKKKIAIEKER
QERLKSLRGQFSVSSIEMNSGGCNGNLTEGASLEILGDAQAGYIVNVVREIGEEAVRIPA
SISAKLKAHQVTGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR
SVDLGLRTALIVTPVNVLHNWRREFIKWAPSELTPLRIFMLEDVPRDRRAHLLAKWRAKG
GVFLIGYSAFRNLSFGKNVKDRHMARETCRALQDGPDILVCDEAHMIKNTKADVTQALKQ
VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDV
KIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFT
NVRAHHEQLRKRSFFAGYQALARIWNHPGILQLTKEEKERVRHEDAVENFLVDDSSSDEN
SDSNVLAGEKMKETNQFMPRKDGDGFFVKGWWNDLLHGKIYKELDQSGKMVLLIDILTMS
SDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKLWKKGKDWYRLDGRTESSERQKLVE
KFNEPLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPV
FAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPETLA
ELDQENGHTCDQINPILAGHSLKQTVPHSNGSSSSDKLMESLLSQHHPRWIANYHEHETL
LQENEEEKLSKEEQDMAWEVYRKSMEWEEVQRVPLDESMPDQKPEVAVAKPHVSETRILS
PRLARRFSTRKCTNLAHLLTLRSQGVKFGKSTVCGECAHEIRWEDLKKS
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaagctgatgatgaggtggtggtggatattgagagtgcttctagcggttct
ttcaatgatgattctgacgatgagggatctttgccttctgaaattgatgacaaagtgatt
gaggaacctctcactgagcaggagatagaagacctcgtttctgaattattagaagtggag
agtaaggctgcagaggcccaagaagctcttgaagaggagtctcttgctaaagtggagagt
gaagttagacaagaactgaagcaaactcttcagggggatgatctggaaactgctgttgct
gatgagatgactactttcaaagaagattgggaagctgttctggatgaacttgaaaccgaa
gctgcgcacttactggaacaacttgatggggctggaattgaactcccaagcctatataag
ttgattgaaaaagaagctcccaatgttagctgcaccgaagcatggaaaaggagaaatcat
tgggtcgggtctgagacaactgctgaaatttcaaagtctattggtgatgctgagcaatat
ctaaagggaaacagacctgttagaaggcgacatggtaaattactagaagagggtgctagt
ggttttctccaaaaaaaaatttgcgctgaagcccaggagcctgtaaagaaagaaggcgag
gtggattgggatcttttcaataaaataatttctgatgagagcggtggtgatgcttcattt
ggcagtaggcagtgggcttctgtttatttggctagcactccacagcaagcttccctgatg
ggactcaaattccctggagttgatgaggtggaggaaattgatgatgttgatggcaattct
actgatccatttgttgcagctgcaattgcaaatgaaagagaactagatctttctgatgag
caaaggaggcaatttaagaaggtcaaagaagaggatgatgcaattgttgatagaaagctt
caaatccgtttgaaacataggaggcatcaaaagaaaagtaaacagcgtgaaaggagcaca
cataccgtgtcaatggagagccaaatactgaagccttgctctgttgatgaatttagccct
gttatgaaagacggaactagtgattatggagaacttgtgtctgacaatgacaaggtcgct
tgtttgaatatggagaccgatacaattggcggttttgatgccagttttcatcttgacaaa
gaagagcctatgagtacttgcaatttgtcagatccacccaaatcctcattgggtgatgtt
attgaacagagaggaactaagcgtctaaatgatggtgaacttgatgctgataataaaaag
cgtcacactggtattactgacagtgatgatgaagcagatgccactgaagataagcttgat
tgcagtacactagatgatcaatcgaagataaaaggtttatctggtgtagtagtttctagt
tctggtagtgattcagaatcagataattcagatgagtcagatgattcagatgattcagat
gcaaagataaatgttactatcagttctaaacggaggcacaaaaagaagattaggaggata
cttgacgatgccgaattaggagaggagacgaaaaagaaaatagcaattgagaaggaacgt
caggaacgactgaagtctttgcgaggacagttttctgtctcatcaattgagatgaactct
ggtgggtgtaatgggaatttaactgaaggtgcaagcctcgaaattctcggtgatgcacaa
gcaggttacatagtgaatgttgtgagggaaataggtgaagaagctgtcagaattccagct
agtatctcagctaaactaaaggcccatcaggttactggaatacgattcatgtgggaaaat
ataatacagtcaatcagaaaagtgaagtctggggataaaggtcttgggtgtattctagct
catactatgggacttggtaaaacttttcaggtgatagctttcttatacactgcgatgaga
agtgttgatttggggttaagaactgcacttatagtcacacctgtcaatgtgctccataat
tggcggcgggagttcatcaaatgggcaccatcagaattaacacctctcaggatctttatg
ctggaagatgtaccaagagataggagggcacatttacttgcaaagtggagagctaaagga
ggtgtgtttttgataggctattctgctttccgaaatttgtcttttggaaagaatgtgaaa
gatcggcacatggccagagaaacttgccgggctttgcaggacgggcctgatattcttgtc
tgtgatgaggcccatatgataaaaaataccaaggctgacgtaactcaagctttgaagcaa
gtaaaatgccagagaagaattgcgcttactggatcacctcttcaaaacaatctcatggaa
tattattgtatggttgattttgtacgagaaggatttcttggaagcagtcatgaatttagg
aaccgcttccaaaaccctatagagaatggtcagcacactaactcaactcagactgatgta
aaaattatgaaccaaaggtctcatatcctttatgaagagttaaaaggctttgtccaaaga
atggacatgaatgttgtgaaaaaggatctaccgcccaaaactgtctttgttataacagtc
aagctttctcccctacaaaggaaattgtacaagagattccttgatgtgcatgggttcact
aatgtcagggcgcatcatgaacagttaagaaaaagaagtttctttgctggttaccaggca
ctggctcggatatggaaccaccctgggatcttgcaattgacaaaagaagagaaggagcgt
gtaagacatgaagatgctgttgagaattttcttgttgatgatagctctagtgatgaaaat
tctgattctaatgtgcttgctggagagaagatgaaggagacaaatcaattcatgccaagg
aaggatggtgatggctttttcgtaaagggatggtggaatgatcttcttcatggaaaaatt
tataaagagcttgatcaaagtggcaaaatggttttgctgatagatatactaaccatgagt
tctgatgtgggcgataaggtattggtttttagtcagagcataccaaccctagacctcata
gaactttatctctcaaggataccacgacgtggcaaacaagggaagctttggaagaaggga
aaagattggtataggctggatggaaggacagagagctcagaaaggcagaagcttgttgaa
aaatttaatgaacccttaaataggagggttaaatgcacgctgatttcaacaagagcaggt
tctttgggtattaatctccatgcagctaaccgtgtcgttatagttgatggttcttggaat
ccaacatatgatctgcaggctatctatcgagcttggaggtatgggcagaaaaagccagtg
tttgcttatcgacttctggctcatggaactatggaagagaaaatatataaacgccaggta
acaaaggaggggcttgctgctagagtggtcgatagacaacaggttcataggaccatatct
aaagaagaaatgttgcatctcttcgagtttggtgatgatgagaaccctgagactttggct
gaacttgatcaagaaaatgggcatacttgtgatcaaattaacccaattttggctgggcat
tcactgaaacaaacagtgccacattcaaatggaagcagttcttctgataagttaatggaa
agcttacttagccagcatcatccacggtggattgccaattatcatgaacatgaaaccttg
ttacaagaaaatgaagaggaaaagctgtcaaaagaggagcaagatatggcttgggaggtg
tatcgtaaatcaatggagtgggaagaagtgcaaagagtaccgctcgatgagtctatgcct
gatcaaaagccagaagtggcggtggcaaagccgcatgtatcagagacccgcatcctctca
ccaagactagccagacgtttctcaacgcggaaatgcaccaaccttgcgcatttgttgaca
cttcgaagtcaaggagtaaaatttggtaaaagtacagtttgtggggaatgtgcacatgag
ataaggtgggaagatttgaagaagagttag
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