Lotus japonicus: 130721060
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Entry
130721060 CDS
T04348
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130721060
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lja04812
]
130721060
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130721060
Cytoskeleton proteins [BR:
lja04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
130721060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
PDS5
Adaptin_N
Cnd1
HEAT_Maestro
Tti2
MMS19_C
INTS1_R4
UTP20
HEAT_DAAF5
V-ATPase_H_N
MMS19_N
Npa1
Dopey_N
Motif
Other DBs
NCBI-GeneID:
130721060
NCBI-ProteinID:
XP_057427774
LinkDB
All DBs
Position
5:38781484..38796178
Genome browser
AA seq
1444 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQVLEASRRTLTSGEVTSLVDCCTDLLRDSNFRVSQG
ALQALASAAVLAGDHFKLHLNAIVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWTCKSWRVREEFVRTVTSAIGLFSSTELPLQRAILPPILQLLSDPNSAVRESAI
LCIEEMYAQAGSQFRDELQRHNLPSSLVKTINARLEGIQPKVHSSDAISSGYMAGEINPV
SVNPKKSSPKAKSSSRETSLFGGEGDVTEKGIDPIKVYSEKELIREVEKIASTLVPEKDW
SIRIAAMQRIEGLVLGGAANYPCFFGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKD
FLGDFEACAEMFIPVLMKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKYDRN
AVLRARCCDYALLILEYWPDAPEIQRSAELYEDMIRCCVSDAMSEVRSTARMCYRMFAKT
WPERSRRLFSSFDPSIQRLINEEDGGKHRRHASPSVRDRGAPMSLTSQASVPSNVTGYGT
SAIVAMDRSSSLSSGASISSGVLLSQAKSYGKGAERSLENMLHASKQKVTAIESMLRGLD
LSDKHNSSALRSSSLDLGVDRPSSRDPPFPAAVSASNHLAGSLMTQSTTSGVNKGSNRNG
GLGLSDIITQIQASKDSGKLSYNSNVGVEPLSAFSSYSIKKATENLQERSSVDENNDIRE
TRRYMNPNIDRQYMDPPYRDGNFRDSPNSYVPNFQRPLLRKNVAARVSAGRRRSFDDSQL
FLGEMSNIADGPASLHEALSEGLGSGSDWSARVSAFNYLHSLLQQGQRGIQEVVQNFEKV
MKLFFQHLDDPHHKVAQAALSTLAEIILTCRKPFEGYMERMLPHVFSRLIDPKELVRQAC
STTLEAISKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGIL
KLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDVQNSLRRALKQR
TPRIEVDLMNYLQNKKERRSKSSYDPSDVMGTSSDEGYAGLSRKNHYIGRYSAGSLDSDG
GRKWSSQDSTLIKTSFGRPASDETEEQSYQNLQTDSNSVILGSKTKDSAYTINSVDQNFG
FQTSQLGHVDSNMNFEGLSSDLDANGLMSLEHLNLAEGFRHDKEFPFELNHNHHTTEDVK
VDSMTDTGLSISQILHMICSGGDGSPVSSKQTALLQLVEASIANDHSIWTQYFNQILTVV
LEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIVIEKLLNVTKDIVPKVSNEAEHCL
TIILSQDDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFE
AFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGKAID
TAHD
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccttggagctcgcgcgggccaaggacaccaaggagaggatggccggcgtc
gagcgcctccaccaggttctggaagcttctagaagaaccctcacttccggcgaggtcact
tccctcgtcgattgctgcacggatctcttgagagacagcaacttcagagtctctcagggc
gcgcttcaggctctggcctccgccgctgtcctcgccggcgaccacttcaagcttcacctc
aacgcgattgtccccgccgttgttgaacgcttgggcgacgccaaacagcctgttcgcgac
gccgctagaaggctcttgctcactctcatggaggtttcatctcctacaataatagttgaa
agagctgggtcctttgcttggacatgcaaaagctggagagtcagagaggagtttgtacgg
actgtcacatctgcaattggtctattttcatctactgaacttccccttcaacgggctatt
cttcctcctattctgcagttgctgagtgatccaaattctgcggttagggaatcagctatt
ttgtgcattgaggagatgtatgctcaagctgggtctcagtttcgtgatgaacttcagcgc
cacaatcttccttcatctttggtgaaaactattaacgccaggctagaggggattcaacca
aaagtgcactcttcagatgctatttctagtggttatatggcaggggaaattaatcctgtg
tctgttaatcccaagaaaagtagcccaaaggcaaagagttcatcaagggagacatctctt
tttggaggagaaggtgatgtcacagagaagggcatagatcctatcaaggtgtattcagag
aaggagttaatcagggaagttgagaagattgcatctacccttgtacctgaaaaggactgg
tcaattcgtattgctgccatgcagagaattgaaggtcttgtgctgggaggtgctgctaat
tatccatgtttcttcggactcctgaagcagcttgttggacctttaagcacacaattgtcg
gatcgaaggtccagcattgtgaaacaggcttgccatctattatgctttttatcaaaggac
tttttgggtgattttgaagcatgtgctgaaatgttcataccagttcttatgaagctggtt
gtgattactgtgcttgtaattgcagagtctgcagataactgcataaaaacgatgttgcgt
aactgcaaagttgctcgtgtacttcctcggatagctgattgtgcaaaatatgaccgtaat
gccgtacttcgtgcaaggtgttgtgattatgctcttttgatactagaatattggcctgat
gcaccagagatacagcgatcagcggaattatatgaggatatgataaggtgttgtgtttca
gatgcaatgagtgaggtgcggtcgactgctaggatgtgctacagaatgtttgcaaaaact
tggccagagcgttcccgtcgtctgttttcatcctttgacccttctattcaacggttaata
aatgaagaggatggaggaaaacacaggcggcatgcatcccctagtgttcgtgatagaggt
gcaccgatgtcattaactagtcaagcttcagttccatctaatgtaactggttatggaact
tctgctattgttgcaatggacagaagttcaagtttatcatcaggggcttctatctcctca
ggtgttcttctttcacaagctaagtcatatggtaaaggtgctgagcgaagtctggaaaat
atgttgcatgcaagcaaacagaaggtcactgctattgaaagtatgcttagaggtttggat
ttgtctgataagcataattcatctgctctccggtcttcaagtttggatctaggagttgac
cgtccctcatctcgtgatccaccattccctgctgctgtttcagcatctaatcatctggct
ggctctttaatgacacaatcaaccacttctggtgtcaataaaggtagtaaccggaatggt
ggtttgggcttatctgacattatcacccaaattcaagcttctaaagattctggcaagttg
tcatataatagtaatgttggtgttgagcctttatcagctttttcatcatactcaattaaa
aaagctactgaaaatttacaagaaagaagttctgttgatgaaaacaatgacatcagggag
actaggcgatatatgaaccccaacatagatagacagtatatggatcctccttatagagat
ggcaactttagggattcaccgaatagttacgtgccaaattttcagaggccgctattaaga
aaaaatgttgctgcacgtgtgtctgctggcaggaggaggagctttgatgatagtcaatta
tttcttggggagatgtcaaacattgcagatggaccagcatctcttcatgaagctctgagt
gaaggacttggttcaggttctgactggtctgctagagtttctgcctttaattatcttcac
tccttattgcagcaaggtcaaaggggaattcaagaagtagtccagaattttgagaaggtc
atgaagttattttttcagcacttggatgatccccatcataaagttgcacaggctgctctt
tccacccttgcagaaattattcttacttgccgaaagccctttgagggttacatggaacga
atgttaccccatgtgttttctcgattgattgatcctaaagagcttgttagacaagcatgc
tctacgactttggaagctattagcaaaacttacagtatagattctctcttacctgcattg
cttcgctcactagatgaacaaaggtctcctaaggcaaagttggccgttattgagtttgca
atcagttcatttaacaagcatgcaatgaatccagaaggtgctgctaatattggcatccta
aaattgtggcttgccaagttagccccattggttcatgacaaaaatacaaagcttaaagaa
gctgctattacatgcattatatcagtgtactctcactttgattcatctgcagttttgaat
tttattcttagtttgtcagttgatgtacaaaattctctgagacgagcccttaaacagcgc
acccctcgtatagaagtagatttaatgaactatctgcagaacaagaaagagcgacgttct
aagtcttcgtatgatccatctgatgttatgggaacatcttctgatgagggttatgctgga
ttgtctaggaaaaatcattacattggaaggtattctgctggttctctagatagtgatggt
ggcaggaagtggagttcccaagattcaaccctgattaaaaccagttttggccgaccagct
tctgatgaaactgaggaacaatcatatcagaatcttcagactgattctaatagtgttatt
cttggttcaaaaactaaagactctgcttacacaatcaattcagtggatcaaaattttggc
tttcaaactagccaacttggacatgtggacagtaacatgaactttgaaggtctgtcatct
gatctggatgctaatggtctgatgtcattagagcatttaaaccttgctgaaggatttaga
catgacaaagaatttccttttgaattgaaccataatcatcacaccactgaagatgtaaag
gttgactccatgacagacactggactcagcatttctcaaattcttcatatgatatgcagt
ggaggtgatggaagccctgtttcaagtaagcagacagcacttctccagctagttgaagct
tctatagcaaatgatcattcgatttggacccagtacttcaatcagattttgacagttgtt
cttgaggtgctggatgattcagattcctcaatcagagagcttgctctttcattgattgtg
gaaatgcttaaaaaccagaaagatgccatggaaaattcagttgagattgtaattgaaaag
ctgcttaatgttacaaaggatattgttcccaaggtctcaaatgaagcagaacattgcctg
accatcattttatctcaggatgatccattcagatgtttaagtgtgattgtccctctacta
gttactgaggatgagaaaactcttgtcacttgcataaattgcctaacaaagcttgtgggg
cggctctctcaggaggaactgatggcccagttaccctcatttctgcctgctttgtttgaa
gcttttggaaaccagagtgcggatgttcgtaagactgttgttttctgtctcgtggatatt
tatatcatgcttgggaaagcattcttgccatatttagaagggcttaacagcacccaattg
aagttggtcaccatttatgcaaatcgaatctcacaggcaaggacaggaaaagcaattgat
accgctcacgattag
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