Lotus japonicus: 130721407
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Entry
130721407 CDS
T04348
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lja
Lotus japonicus
Pathway
lja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130721407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lja02000
]
130721407
Transporters [BR:
lja02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
130721407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA
SMC_N
AAA_16
AAA_29
AAA_23
AAA_22
AAA_25
AAA_18
AAA_28
nSTAND3
AAA_33
AAA_17
RsgA_GTPase
Zeta_toxin
RuvB_N
NTPase_1
DO-GTPase1
NACHT
cobW
AAA_5
AAA_11
Motif
Other DBs
NCBI-GeneID:
130721407
NCBI-ProteinID:
XP_057428191
LinkDB
All DBs
Position
5:10393625..10399615
Genome browser
AA seq
1099 aa
AA seq
DB search
MTLLLGPPGSGKTTLLLALAGKLGKDLKHSGRVTYNGHELDEFVPQRTSAYISQHDNHIG
EMTVRETLAFSARCQGVGQNYELLTELLRREKEAKIKPDADVDASMKAAVLEGQQTSVVT
DYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPVRVFFMDEISTGLDSSTT
FQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIIVLTDGHIVYQGPRENVLEFFESM
GFKCPERKGVADFLQEVTSRKDQWQYWAYKDEPYRFVTVKDFSEAFQSFDVGQKLREELA
NPFDKSKCHPNALTKKKYGVNSKELLSVCASREFLLMKRNSIVYIFKVTQLIFLAVMAST
LFIRTKMHRDTVEDGGAYMGALFFTVSVAMFNGILELHMTILKLPVFYKQRDLLFYPSWA
YSLPPWILKIPITLLEVAIWEGISYYAIGYDPIFARLLKQYLIILCINVMASALFRLIAA
LGRDVVVANTIGSFTLLVVLVLGGFVISRDDVHKWLIWGYWSSPLMYGQNAIVVNEFLGH
SWTKVIPNSNETLGVLILKTRGFFTEAYWYWIGVGGLIGYIFLFNFLFILALRYLSPLRT
DQAGLSKEKLLERNASTAEEFIELPTRKSSSETKMVEEASISSRSFSGRVNDVNARSGRR
GMVLPFKPLSLTFDEISYSVDMPQEMKNQGVFEDRLKLLKGVSGAFRPGVLTALMGVSGA
GKTTLMDVLAGRKTGGYIEGAIKISGYPKNQQTFARIAGYCEQFDIHSPNVTVYESLLYS
AWLRLPREVDTATRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVAN
PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGG
EQIYAGPLGRQCSQLIQFFEAIHGVPKIRDGYNPATWMLEVTSAGTEASLKVNFTDVYKN
SELHRRNKQLIQELSTPPQGSKDLHFDTQYSQTWVAQFKACIWKQHLSYWRNTSYTAVRL
LFTTLIALLFGLLFWQIGSKRGKEQDLFNALGSMYAAVNFIGVQNSASVQPIISVERTVF
YRERAAGMYSALPYAFAQV
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcttttggggccaccaggctcaggaaagactactttgctgttggcgttagct
ggaaaacttgggaaagatttgaaacattctgggagagtaacatacaatggtcatgagctg
gacgagtttgtgccacaaaggacatcagcttatataagtcaacatgataatcacattgga
gaaatgactgtccgagaaacgctagctttctcagcaagatgtcaaggagttggacagaac
tatgagttgttgactgaactactaagaagagagaaggaagcaaagattaaaccagatgct
gatgttgatgcctctatgaaggcagctgtactagaaggacaacagacaagtgtggtcact
gactatattcttaagattttggggcttgaagtgtgtgctgacattatggtaggtgatgga
atgataagaggcatctcaggagggcagaaaaaacgagtcacaacaggggagatgctagtt
ggacctgtaagggtgtttttcatggatgagatatcaactggtttggacagctccactact
tttcaaataatcaactcaatccggcaatccatccatattctaaatggaaccgcacttgtg
tccttactacagccagcaccagaaacttatgaactgtttgatgatataatagttctaaca
gatgggcatattgtgtaccaaggaccaagagaaaatgtgcttgagttttttgaatcaatg
ggtttcaagtgtcctgagagaaaaggagttgctgacttcttacaagaagtgacatcaaga
aaagatcaatggcaatattgggcatataaggatgaaccttatagatttgttacagtcaag
gatttttctgaagcattccagtcatttgacgttggtcagaaacttcgagaagagttggcc
aatccttttgacaagtctaaatgccatccaaatgccttgacgaaaaagaagtatggtgtt
aactcaaaggaactgctgagtgtttgtgctagcagagaatttttgcttatgaagcgaaat
tccattgtttacatattcaaagtcacccaacttatttttttagctgtcatggcatcaaca
ttatttatacgaactaagatgcatcgagataccgtggaggatggaggagcttacatgggt
gctctgttcttcacagttagtgtagcaatgttcaatggaatattagagctacatatgacc
atcttgaaacttcctgtcttttacaagcaaagggaccttcttttctatccttcatgggct
tattctcttccaccatggatcctcaaaataccaataaccctcttagaagttgccatctgg
gaaggcatctcttactatgccattggctatgatccaatttttgctaggcttttaaaacaa
tacttgataattctatgcattaatgtgatggcttctgcattatttcgattgatagcagca
ttaggaagggatgttgtagtcgcaaacactattgggtcctttacgttactagtagttctg
gttttgggaggatttgtgatttcacgagacgatgtgcacaaatggcttatatggggttac
tggtcctcaccattgatgtatggacagaatgctatagttgtcaatgaatttctcgggcat
agttggacaaaggttattcctaattccaatgagacattgggagttttgatattgaaaacg
cgtgggtttttcacagaagcttattggtattggattggtgtaggaggattgattggttat
atttttctatttaatttcctcttcatcttggctttgcgatatctcagtccactccgaacg
gatcaagcagggctatccaaagagaaattgctcgagagaaatgcttcaacagctgaggag
ttcattgagttaccaacacgaaagagttcttctgaaacaaagatggtagaagaagcaagt
atatcatccaggtcgttttctggaagagtcaatgatgttaatgcgagaagtggaaggagg
ggcatggttcttccttttaaacccctctctctcacttttgatgagatatcatattccgta
gacatgccgcaggaaatgaaaaatcaaggagttttcgaggaccgtcttaaacttttgaag
ggtgtcagtggagcctttaggcctggagtactaacagctctaatgggtgtaagtggtgct
ggcaagactactctgatggatgttttagctggaaggaaaactggtggatatattgaagga
gccatcaagatatctgggtacccaaagaatcaacaaacatttgctcgcatagcaggttat
tgtgaacaatttgatatccactcacctaatgttacagtttatgaatctttgctatattct
gcctggcttcgattaccacgtgaagtggatactgcaactagaaagatgttcattgaggaa
gttatggagcttgtggagcttaattcattaagggaagcacttgttggattgccgggtgag
actggactttcaactgagcagcgcaagagacttacaattgcagttgaacttgtagccaat
ccatcaataatattcatggatgagccaacctctggtcttgatgctagagcagctgcaatt
gtaatgagaactgtgaggaacaccgtggacacaggacggactgtggtttgcaccatccac
cagccaagtattgatatatttgatgcatttgatgagctgctacttctaaaattgggaggg
gagcaaatatatgctggtccattaggccgccagtgttcccaactgattcagttctttgag
gctattcatggagttcccaagattagagacggttataatcctgcaacctggatgttggaa
gttacatcagcagggactgaagctagtcttaaggtcaatttcaccgatgtttacaaaaac
tcagaactacaccggagaaataaacaactgatccaggagctcagtacacctcctcaaggt
tcaaaggatctacactttgatactcagtattcacagacttgggtggcacaatttaaagct
tgcatatggaaacaacatttatcttattggcggaacacatcatatactgcagttagactc
ctatttacaacactgatagctttattgtttgggctcctattttggcagattggttccaaa
aggggaaaggagcaagatcttttcaatgcactgggttcaatgtatgctgcagttaacttc
attggagttcaaaatagtgcctcagtgcagccaatcatatcagttgagagaacagtattc
tacagagaaagagctgctggaatgtattcagctttgccatatgcttttgcacaggtatag
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