Lotus japonicus: 130721978
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Entry
130721978 CDS
T04348
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
lja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130721978
03460 Fanconi anemia pathway
130721978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130721978
03036 Chromosome and associated proteins [BR:
lja03036
]
130721978
03400 DNA repair and recombination proteins [BR:
lja03400
]
130721978
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130721978
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130721978
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130721978
FA (Fanconi anemia) pathway
Downstream FA components
130721978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
130721978
NCBI-ProteinID:
XP_057428549
LinkDB
All DBs
Position
6:complement(4335790..4343076)
Genome browser
AA seq
1065 aa
AA seq
DB search
MSTWKIFSDAGTNFRWQISKDAASNVPPPLLSPSTSPLPSMSDLLLQPSTLQLFTHQGEQ
ELGIGDNSSSCGFGNSLFKTGSGKRVTISSTGLVRAKTLLGLKEDAVGSTVLSPQHRIGE
AHDGKQQLPRPNLPQPLHGVKESCKIMSAVPFQSPLVSGRGSSTLENGFEPDTCGAAVKP
APIKFQTAGGRSLSISNDALRRARSLLGDPDLGDFFDGGDVGGSIFSFPDTRQTNAASPC
ERSAFSTPLIHHVTSGNNDKMKSFTYPLQSSRQQTEFSTKFLCEGNGDNLIMKFDAVGNE
NVSSRKSSNVCGQKPLHDRNERADQAAYHSSLTGFSSKIDSCGVPVGGRPLVDISNTINT
AHPNNRLPASGKRRLGLRVIASPFKKPRNSQVFADQEVENFPNASGASECKKKVSTRYPF
QYPRMHIKDYFAVPPLQQEVHFPNPVGQVTSGNAEKYMFCDGSGNNGMGAEAFVNLLAQH
GTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLTVSNVLEELKYRYEREVNHGH
RSTIKKILEGDALPSAMMILCISRIHSDHVPESGSLFETRTGDQRKETVEIELTDGWYSI
NAILDIPLSKQRAAGRLFVGQKLRIWGAGLCGWNEPVSPLEVSSTVRLSLHINGTYRAHW
AERLGFCKVAGPPLAFRCIKSNGGLIPQTLAGITRIYPILYKERLSSGRSVVISERMENK
MMELYNQRRSAVIDSIVSEHQKERRGSHIYDDSESEGAKIYKMLETAEEPEFLMADMSPE
QLSSFSAYKAKLNAIRQSKMENSIEKSLQDAGLRHREVTQFMRLRIVGLTYKNGQDKPKE
GIVTIWNPTEKQRQELIEGEAYVISGLIPSGSDLDNLQLQTKGSSTKWLPLSSNSREQFK
PFFSNRQSIPLSSLTDIPLSNEFDVAAYVVHVGEVYQSSQQKKQWIFVSDGSMYGLQSEK
LTNTLLAICFCSPLIDHDSFPPINYNLAGSTVGFCNLIKKEKDHTNHVWVADATESSTYY
LNFDSPYCSHLRNAASSVRAWASNSSLTIEKLKEKVLLMIGDSRT
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctggaagatattttccgacgccggaaccaatttccggtggcaaatctctaaa
gacgccgcttccaatgttccgccccctcttctctctccctccacctctcctctcccttcc
atgtccgatcttctcctccaaccttcaactctgcaacttttcacccatcaaggtgaacaa
gagcttggaataggtgataatagtagtagttgcggattcggtaattcgctttttaagacc
ggctccgggaaaagagttaccatatcttctactggtttggttcgagcaaagacgttactc
ggcttgaaagaagacgcggttggcagtactgtcctgagccctcagcatcgaattggcgaa
gcacatgacgggaaacaacaattgccgcggcctaatttgccgcagccgctacatggagtt
aaggagagttgtaagattatgagtgctgtgccatttcaaagtcctttagttagtggtaga
ggtagtagcactttagagaatggttttgagccagatacatgtggtgcagcggttaagcca
gctccgattaagttccaaactgcaggcggacggtctttatctatttctaatgatgccctg
cgacgtgctaggagccttcttggtgatccggacctgggggatttttttgatggaggggat
gttggtggttcgattttctcgtttccggatacgagacagactaatgcggcttcaccttgt
gaaaggagtgcgtttagtactcctttgatccatcatgtaacgtcagggaacaatgataag
atgaaaagtttcacataccctttgcagtcttctagacaacaaacggaattctcaaccaag
tttctttgtgaaggtaatggggataacttaatcatgaaatttgatgctgttgggaacgaa
aatgtttctagccggaaaagtagcaatgtttgtggtcagaaacccttacatgacaggaat
gaaagggctgaccaagcagcataccattcttcattgactggtttttcttcaaaaatcgat
tcatgtggagtaccagtaggaggaaggccattggttgatatttccaacactattaacaca
gctcatccaaacaataggctgcctgcaagtggaaaaaggagattaggattacgtgtaatt
gcttctcccttcaaaaagcctcgtaattctcaagtctttgctgaccaagaagttgaaaat
tttcctaatgcctcaggtgcttctgaatgcaaaaaaaaggtttctacccgatatccattt
cagtatccgaggatgcacatcaaggattattttgcagtgcctccattacagcaggaagtg
cattttcccaatccagttggacaggtgacatcaggtaatgcagaaaagtacatgttctgt
gatgggtctggtaacaatggtatgggagcggaagcctttgtcaatctattggctcaacat
ggaacttcactgcattttgcttctaaagagtgggtcttgaatcattacaagtggattgtc
tggaaactggcatgctatgagagatgcaatccggctaaacatgctgggaaatttttgacc
gtatcaaatgtgcttgaggaacttaagtacagatatgaaagagaagtgaatcatggccac
cgatctaccatcaagaaaattcttgaaggggatgcattgccttctgcaatgatgattctc
tgcatttctagaattcactctgatcatgtgccggaaagtgggtctttatttgagacaaga
actggggatcagaggaaagagacagtagaaattgaacttactgatggatggtattcaata
aatgccattttagacattccattgtcaaaacaacgagctgctggaagattgtttgtaggg
cagaagcttcggatatggggagcaggattatgtggttggaatgagccagtttcacccctt
gaggtatcatcaacagttaggttatcgctacacataaatggaacatatagagctcattgg
gcagaacggttagggttttgtaaggttgctggtccgcctttggctttcagatgcataaaa
agcaatggtggtctaatacctcaaactttggctggaattacccgcatatatcctattctt
tacaaggaaaggttaagtagtgggcggtctgttgtcatatcagagaggatggagaataaa
atgatggagctgtacaatcagaggcgctctgctgtcatagatagcatagtttcggagcat
cagaaggaaagaagaggttcacatatttatgatgacagtgaaagtgaaggggctaagatt
tataaaatgctggagacagctgaagaaccagaattcctaatggcagatatgagtccagag
cagcttagttctttttctgcttataaggccaaattaaatgcaatcagacagtcaaaaatg
gaaaactcaattgagaaatctttgcaagatgctggcttgagacatagagaagtcacacaa
tttatgaggttgcggatagttggattaacttataaaaatggacaagataagcctaaagaa
ggtatagtaacaatctggaacccaacagagaagcagcgtcaggaactgatagagggagaa
gcatatgtaatttcaggactcataccatcaggttctgatttggataaccttcaattgcag
actaaaggatcttctaccaagtggttgcctttatcttctaattcaagggaacagtttaag
ccatttttcagtaatcgacaatcaatcccattgtcaagtttgactgacatccctctttct
aatgagttcgacgttgctgcgtatgttgtgcatgtgggagaggtttatcaatcaagtcag
caaaagaagcaatggatttttgtgtctgatggatccatgtatggtttgcaatcagaaaag
ttaaccaacactttgcttgccatctgcttttgctctccattgattgatcatgattcattt
ccaccaatcaactataaccttgctggatccacggttggtttctgtaatcttattaaaaag
gaaaaggaccacacgaaccatgtctgggttgctgatgctactgaaagctcgacctattat
ttgaattttgattccccttactgttctcacctcagaaacgctgccagctccgtcagagca
tgggcaagcaattctagcttgacaatagagaaactcaaggaaaaggtgttgcttatgatt
ggtgatagtagaacctga
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