Lotus japonicus: 130722053
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Entry
130722053 CDS
T04348
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130722053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130722053
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130722053
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130722053
NCBI-ProteinID:
XP_057428626
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Position
6:complement(59366137..59372025)
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AA seq
877 aa
AA seq
DB search
MEAAIDVLPPKRPAPSGISPQGHKRLKLSSDSLPYSAHDKAVPETPTNVEDFSNPFAISD
FLNRLESGKFGSVTKDIEALIARKMQVLGPFFAKFPKLVTQSLKVVVNHDEESNKLENEK
GTVMSHDEVIDLEEERTKKDASAAQLVVIIDSDEEDDRDKNSSSLPFNEVMLPNSLQSPA
LRMMGYRAPIAYHGESEDLKFEPTRAAKDKTQRDKGVYVGVQEEDEVDTEDDGLDDIWRE
MSMAVECSKDASVNPPPEEEVEKEDDCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYK
VKRSTRTYMADSWNTKAKVDVYGINVAEDDIMFTEISAHPRHMKQMKSHQIEGFNFLVRN
LVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQV
EDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDIL
LKVPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKF
LKMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVIQDLREMTSKVLHYY
KGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKVSSMGSALYLHPRLIPVADKC
GENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLCDSSNEKLLVFSQYLLPLKYLERLVM
KWKGWSFGKEIFGISGESSSEQREWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLI
LDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEEDDHITCFKKELISKMWFEWNE
YCGDRAFQVETVSVNECGDEFLETPMLGEDVKALYKR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcaattgatgtattaccaccaaaacgccccgctccaagtggaatttctcct
cagggacataaaagactgaaactatccagtgatagtctgccatactcagcgcatgataaa
gctgtaccagagacacctacgaatgttgaagacttcagcaatccatttgcaatctctgat
tttttaaatcgtttagaaagtggaaaatttggaagtgtcacaaaggacatagaggccctt
atagcccgaaaaatgcaagtactgggccctttctttgcaaaatttcctaaacttgttact
caatcattaaaagtggttgtgaaccacgatgaagaaagtaataagttggaaaatgaaaag
ggtaccgtcatgtcacatgatgaagtaatagatttggaagaggagcgcactaaaaaggat
gcttctgcagcacagcttgttgtgatcattgattcggatgaggaagatgatagagataaa
aattcttcttctcttccattcaatgaagtaatgttgccgaactcactccaatctcctgca
ttgaggatgatggggtatcgagctcccattgcttaccatggagaaagtgaagatctcaaa
tttgagccaactcgagctgctaaagataaaactcagagagacaaaggtgtttatgttggt
gtacaggaggaagatgaggttgatactgaagatgatgggcttgatgatatttggagggaa
atgtcaatggccgtagaatgttcgaaggatgcttctgtgaatcctccacctgaggaagaa
gttgaaaaagaagacgactgtgatcattcttttgttttaaaagatgatctgggttatgtt
tgtcgtgtttgtggggtcattgaccgaggaattgaaaccatatttgagttccagtacaag
gttaaaaggagcacaagaacctacatggctgattcatggaataccaaagcaaaagttgat
gtatatggaattaatgttgctgaagatgacatcatgtttactgaaatttcagcacatcct
agacatatgaaacaaatgaagtctcatcaaattgaagggttcaattttctcgtcagaaac
cttgtaggtgacaatcctgggggctgcatcttggcccatgctccaggatctgggaagaca
ttcatgataatcagcttcatgcaaagttttctaggaaagtacccaaatgctagacctctg
gtggtgcttcccaagggaatactatctacttggaaaaaggagtttcagacatggcaagtg
gaggacataccactttacgatttttacactgtgaaggcagacagtagatcacagcagttg
gaagttttgaaacaatgggtggaatgcaagagcatccttttcttggggtacaagcagttc
tcttcaattgtctgtgataatagtactaacagcatatcaatatcttgccaagatatattg
cttaaggtaccttcaattctcattttagatgaaggacataatccgcggaatgagaatacc
gatatggtgcagtcccttgcaaaggtaaaaacacctagaaaagttgtactgtcaggtacc
ttgtatcaaaaccatgtgaaggaggtatttaatattttgaatctggttcggccaaagttt
ctaaagatggaaacatctaggcctattgtcaagcgcattcacagtagagtacatatatcg
ggcaagaaatctttctatgatttggtggaggacactttgcagaaggacccagattttaaa
aggaaaatagctgttattcaagatttgcgtgagatgacgagtaaggtacttcactattac
aagggagattttcttgatgagcttcctggtctggttgattttactgtgttgcttaagctg
accccaagacagaagcatgaaactgggaaattaaagaatatatctagaaagttcaaggta
tcttctatgggcagtgcgctgtatcttcaccctagattgatacctgttgcggataaatgt
ggtgaaaactctgtatctgaccaaatggtggatgatttaatagagaagttggatgtgaaa
gatggagtgaagtcgaaattcttcatgaacattctaaacttgtgtgattcatccaacgag
aagcttctggtgttcagccaatatctcttacctttgaaatatttagagaggttagttatg
aaatggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctct
gagcaaagggagtggtccatgaataaattcaacaattcaccggatgctaaaattttcttt
ggctcaatcaaggcttgtggagagggtatatcattggttggggcatcccgagtacttatt
ttggatgttcatctgaacccatcagttactcgtcaagctattggtcgtgcattccgacca
ggacagacaaagaaggtctttgtgtatcgattgatagctgctgattctccggaagaggac
gatcacattacttgtttcaagaaggaattgatttcaaagatgtggtttgagtggaatgag
tactgtggtgatagagccttccaagtagagactgttagtgtcaatgaatgtggtgatgag
ttccttgagactccaatgttaggagaagatgtaaaagctttgtataaaaggtag
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