Lotus japonicus: 130722073
Help
Entry
130722073 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130722073
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130722073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130722073
NCBI-ProteinID:
XP_057428669
LinkDB
All DBs
Position
1:119059467..119061832
Genome browser
AA seq
406 aa
AA seq
DB search
MKGILLVLLILFFIATPTLCARVMLDADSSFDVVSYGAIGDGQTDDSQAFEKAWQTVCGA
TQDTTTLLIPEGKTFLLQPILFKGPCKSNTINIEFQGTVIAPKNPDSWKWGTDLSRWAWV
KFQGISNLIIQGGGTIDGQGSSWWNQYSKDEEEDGPKKPTALQFIECKNLKLKNLTHINS
PQNHISIASCSDSSVSNAHIIAPEKSPNTDGIDISESSNILIENSKIETGDDCIAINSGS
TFINITGVTCGPGHGISVGSLGRNGKYETAEEIHVHNCTFIGTQNGARIKTWMGGSGYAR
KIRFEDIILVGAKNPVIINQHYEDNEYSGLNTAVQVSDVTYENVRGTSVSDDAITLNCDA
KVGCTNIVFNNINITSTTGGEEHVSCNYASGKCSMSNPNVTCLYGQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcatacttttagtccttttaatattatttttcattgctacacctacgttgtgt
gctagagtaatgcttgatgcagattctagcttcgatgttgttagctacggtgcaataggg
gatggtcagactgatgattcacaggcctttgagaaagcatggcaaactgtttgtggtgca
actcaagacaccacaacacttctcatacctgaagggaaaacattcttgttgcaacccatt
ttattcaagggtccttgcaaaagcaacactattaacattgagtttcagggaactgtcatc
gctccaaaaaatcctgattcttggaaatggggtactgatcttagtaggtgggcatgggtg
aagttccagggaataagtaaccttatcatccaaggaggaggaacaattgatggccaaggt
tcttcttggtggaaccaatactctaaggatgaagaagaggacgggccaaaaaaaccaact
gcacttcaattcattgaatgtaagaatctaaagcttaagaatttaactcacatcaacagc
ccacaaaatcatattagcatagcttcatgcagtgactctagcgtctccaacgctcatatt
attgccccagagaaaagtccaaacactgacgggattgatatctcagaatcatctaacatc
ctcattgagaattcaaagattgaaacgggagatgactgcattgccattaatagtggttct
accttcatcaacataaccggtgttacatgtggtcctggccatggcataagtgtgggcagc
cttggacgaaatggaaagtatgaaacagcagaagagatacatgtgcataattgtaccttc
atagggactcaaaatggagctagaatcaagacatggatgggaggatctggatatgcaaga
aagataagatttgaagatattatacttgttggagcaaagaaccctgtgatcattaaccaa
cactatgaagataatgaatatagtggtctaaacacggcagtgcaagtgagtgatgtgact
tatgagaatgtgagaggaacctcggtttctgatgatgcaatcacattgaattgcgacgct
aaagttggctgcaccaatattgtgttcaataatattaacataacctctacaactggaggg
gaagaacatgtgtcctgcaattacgcaagcggcaaatgctctatgagtaatccaaatgtc
acatgtctttatggacaataa
DBGET
integrated database retrieval system
