Lotus japonicus: 130722158
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Entry
130722158 CDS
T04348
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lja
Lotus japonicus
Pathway
lja04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130722158
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lja04040
]
130722158
Ion channels [BR:
lja04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130722158
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
130722158
NCBI-ProteinID:
XP_057428788
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Position
6:50035354..50040771
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AA seq
733 aa
AA seq
DB search
MFDCGGGYKSQSVNGHREKFVRFGDLDSSLSSSSDAGVKTCGFSIDKLSHGGRGSSTPSR
SFKRGMKKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCI
LSVSVDPLFFYLPVINDSLLCLGIDRKLAIIVTTLRTVIDAFYLIHMALQFRTAYIAPSS
RVFGRGELVIDPAQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKQALLF
LILLQYIPRFLRMVPLSSELKRTAGVFAETAWAGAANYLLLFMLASHIVGSFWYLLAVER
NDFCWQKACSDDGYNKKFLYCGNQYMEGYSAWQNRSKAILTSQCSADDDNPPFDYGIFQQ
ALSSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLQTSTYTGEIIFSIALAIAGLILFALL
IGNMQTYLQSLTIRLEEMRIKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEEI
LVQSLPKDLQRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPSLFTESTYIVREGDP
VDEMLFIIRGRLESVTTDGGRSGFFNRSFLKETDFCGEELLTWALDPKTGSNLPSSTRTV
KALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKR
KIMELRRKEESEESEGTRSNAGGSSYSLGATILASRFAVNALRGVHHNRNAKTARELVKL
QKPPEPDFTADDM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtggtggtggttacaagtcacagtctgtgaatggccatcgggaaaaattt
gtgaggtttggtgacttggattctagcctatcttcatcttctgatgctggagttaaaaca
tgtggatttagtattgataaattaagccatggtggccgtggaagtagtacaccctctagg
tcttttaaaagaggaatgaaaaagggatctgaaggactgaagtcaattggccgatcactt
ggatttggggtatctaaggctgtattcccggaagatcttaaagtatcagagaagaagata
tttgatcctcaagacaagtttttgctcttgtggaacaagctttttgttatctcatgcatt
ttgtctgtgtctgtggatccactgtttttttatctccctgtcattaatgattcattactc
tgtcttggtatagaccggaagttagcaattatagttaccaccttgaggacagttatcgat
gctttctatcttatacacatggctctccaatttcgtactgcttatattgctccatcatct
cgtgtttttggacggggtgagcttgtgatagatcctgcacagatagctaaacggtactta
cagcgatatttcatcattgatttcttatcagtgttgccattaccacagattgtggtttgg
agatttcttcagaggtcaaaaggttcagatgtacttgcaaccaagcaggccttgcttttc
cttatcttgcttcagtacattcctagatttctccggatggtaccattaagttcggaactt
aagagaacagctggtgtctttgctgaaactgcttgggcaggtgctgcaaattatttgcta
ttgttcatgcttgccagtcatatagttggatctttttggtacttgttagctgttgaacgc
aacgacttttgctggcagaaggcttgtagtgatgatggatacaacaagaaattcttgtac
tgtggcaaccaatacatggaaggttatagtgcctggcagaatagaagtaaagctattctt
acatcacagtgctctgcagatgatgataatccaccttttgactatggaattttccaacaa
gccttgtcatccggtattgtttcatctaagaagttcttttccaagtactgttactgttta
tggtgggggctccagaatttgagtactcttggccaagggcttcaaactagcacttatact
ggggagattatcttttcaatagcattagccatagctggccttatcctctttgcacttctg
attggtaacatgcagacttatctccagtctcttaccattaggcttgaggaaatgagaatc
aaaagacgtgattcagaacagtggatgcatcatcgcttgctcccacaagagctcagagag
cgtgtgagacgatatgatcaatataagtggttagcaacacgaggtgtagatgaagaaatt
ttagttcagagtctcccaaaggatcttcaaagagacattaagcgtcacctctgcctagct
ttagttagaagggttccactatttgagaacatggatgagagattgcttgatgccatatgt
gagagactgaagccaagtttatttacggagagtacttatattgtccgggaaggagatcca
gttgatgaaatgcttttcatcatacgaggccgccttgagagtgtcaccacagatggtggg
agaagtggattttttaatcgcagttttttaaaagagactgacttttgtggtgaggagctt
ttaacctgggcactggatcccaaaactggctctaacctcccgtcatctactcgaacagtt
aaggctttaacagaagttgaggcttttgctttaactgctgaagagctaaaatttgttgcc
agtcagtttaggcgccttcacagcagacaggttcagcacaccttccgcttttactcccaa
caatggaggacctgggctgcatgcttcattcaagcagcatggcgtcgctattccaaaagg
aaaattatggagcttcgtcgaaaggaagaatcagaggagtcagaaggaacccgcagcaat
gctggtggcagttcatacagccttggtgccaccatcttggcctcaagatttgccgtgaat
gctcttcgtggggtgcatcacaatcggaatgctaagactgctagggagttggtcaaacta
cagaaacctccagagcctgactttactgctgatgatatgtaa
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