Lotus japonicus: 130722488
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Entry
130722488 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130722488
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
lja
Lotus japonicus
Pathway
lja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130722488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130722488
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130722488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
130722488
NCBI-ProteinID:
XP_057429215
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All DBs
Position
6:23019034..23021614
Genome browser
AA seq
401 aa
AA seq
DB search
MRKRKGARSEIEEEEGEAVQVQEHHNNGKNENEGCEGNGFFACYLLASLNPRFKGHTYIG
FTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPVESLAV
RKAAVNFKSLSGIANKIKLAYTMLTLPSWENMNMTVHFFSTKYMKHCGGCPNLPEHMKVE
TGSMDELPCYTERIDGLSENEDDVEFENNASTSGSVPVASDDSLTLDSPKSPNHWDRISE
AFGGSKESEAREPPGHPSTTENPSLSFGLITTTPVKSSPVASSKRVGTITENPSQSFGFI
TTTPVKSSPVTSSKRVEIIEDADLLNVMNKSDGELSQPESVKSDAVDVNSTFIVPHEAEI
VDLSTPSPSWRNIIDRKKRRVSSSVGSNFIDLTKSPNFVQL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagagaaagggtgcaagatctgagatagaagaagaagaaggagaagctgtgcaa
gttcaagagcaccataacaatggcaaaaacgaaaacgaaggttgtgaaggaaatgggttc
ttcgcttgctacctcttggcctctctaaaccctcgtttcaaaggccacacctacatcgga
ttcacagtgaatccgcggcggcggatcaggcaacataatggagagattgggtgtggagct
tggagaaccaaaaagaggcggccttgggagatggttttgtgtatctacggattcccaact
aatgtctctgctcttcagtttgaatgggcttggcaacaccctgttgaatcattggctgta
aggaaggcagctgttaattttaaatccctctcaggaatagccaataagattaaacttgca
tacactatgctcacccttccatcctgggagaatatgaatatgacagtgcacttcttttcg
acgaagtacatgaaacattgcggtggttgcccaaacttgccagagcacatgaaggtcgag
actggttcaatggacgaacttccctgttatactgaacgaattgatggtttgtctgagaat
gaagatgatgtggaatttgagaataatgctagtactagtggttctgttccagttgcaagt
gatgattctttaactcttgattcaccgaagagtccaaatcactgggacaggattagtgaa
gcgtttggggggagcaaagaatctgaagcaagagaaccaccaggtcatccatccactaca
gaaaacccgagtctatcatttggtttaatcacaaccacgccggtgaaatcatcgccagta
gcttcatcaaaaagagtagggactattacagaaaacccgagccagtcatttggtttcatc
acaaccacaccggtgaaatcatcgccggtaacttcatcaaaaagagtagagattattgaa
gatgcagatcttttgaacgtgatgaataagagtgatggtgaattgagtcaaccagaatct
gtaaaatcagatgctgttgatgtcaatagcacattcattgtgccccatgaagctgagata
gttgatttgtccaccccttctcctagctggagaaacattatagataggaagaagaggaga
gtttcctcttctgttggttctaattttattgacttaactaagtccccaaattttgtccaa
ttgtaa
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