Lotus japonicus: 130722497
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Entry
130722497 CDS
T04348
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
lja
Lotus japonicus
Pathway
lja00730
Thiamine metabolism
lja01100
Metabolic pathways
lja01240
Biosynthesis of cofactors
Module
lja_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
130722497
Enzymes [BR:
lja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
130722497
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
130722497
NCBI-ProteinID:
XP_057429225
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Position
6:25962369..25974075
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AA seq
653 aa
AA seq
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MASVHANVTSVVCKNGNHASQTKFPSTAFLPGFDVVGRAPSAWKKELVPFSMALVPRATL
TFDPPSTNADKAKQKKHTVDPASPDFLPLPSFEQCFPKSTKEHREVIHEETGHVLKVPFR
RVHLAGEEPHFDTYDTSGPQNLSPRIGLPKLREEWVDRRQKSSPPRFTQMYFAKQGIITE
EMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVAS
SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIA
EDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKTGVIAYKIAAHAADLAKGHPHAQEWDDALSKARFEF
RWMDQFALSLDPMTAMSFHDESLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEKHGYG
TAEEALLRGMDAMSAEFQSAKKTVSGEQHGEAGGEIYLPASYLSSKEKQLKQG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgcatgccaatgtgacatcagttgtttgcaaaaatggcaaccatgcttcg
cagaccaagttcccgagtactgcattcttgcctgggtttgatgttgttgggcgtgctcca
agtgcttggaagaaggaacttgttccgttttccatggctttggtacctagagccacattg
acatttgatcctccaagtactaatgcagacaaagccaaacaaaagaagcacacagttgac
cctgcttctcctgatttccttcctcttccttcctttgaacagtgcttcccaaagagcaca
aaagaacacagggaagtcattcatgaagaaactggtcatgtgctcaaagttccctttcga
cgagttcacctggctggggaggaaccacactttgatacctatgacactagtggtccccaa
aatcttagcccaaggataggactcccaaaattgcgtgaagagtgggttgatagaagacag
aaaagcagtcctccaagattcactcagatgtactttgctaagcagggaatcattactgag
gagatgctttactgtgctgctcgtgagaagctcgacccagagtttgtgaggtcagaagtt
gctcgtggacgagctatcatcccttccaacaagaagcacttggagttagagcccatgata
gttggaagaaactttttggtgaaagtaaatgccaatattggaaattctgcagttgcaagc
tctatagaagaggaagtttacaaggttcagtgggcaactatgtggggagctgatacagtc
atggatctctcaactggtcgccacatccatgaaactcgagagtggatcttacgcaactct
gctgtaccggttgggactgtacctatttatcaagcacttgagaaagttaatggaattgct
gaagatcttagttgggaggttttcagggataccctgattgaacaagctgaacagggtgta
gattacttcactatccatgcaggagttcttctgagatatattcctttaacagcaaaacgc
atgacaggaatagtctccagaggaggatccattcatgcaaaatggtgcttagcttatcac
aaagagaattttgcatatgagcactgggatgacatacttgacatctgcaatcagtatgat
gtggctctatccattggtgatgggttaagaccgggatccatctatgatgcaaatgataca
gctcaatttgctgagctcttgacacaaggggaactgacccgaagagcatgggagaaggat
gtccaggtgatgaatgaaggacctgggcatgttccaatgcacaagattcccgaaaatatg
cagaaacaactagaatggtgtaatgaagctccattctacactcttggtcctttaacaact
gatattgcccctggttatgatcatatcacctctgctattggtgctgcgaatattggggca
cttggcacagctcttctgtgttatgtgactccaaaagaacatcttgggttgccaaatcgg
gacgatgtgaagactggtgttatagcttataaaatagctgctcatgctgctgatttagcc
aaaggtcatccacatgctcaagaatgggatgatgcgttaagcaaggcaaggtttgaattt
cgatggatggaccagtttgctttgtcattggatccaatgacagccatgtccttccatgat
gaatcgttgccatcagaaggtgcaaaggtagcacatttctgctcaatgtgtggtcctaaa
ttctgctctatgaaaataactgaagatgtgaggaagtatgctgagaaacatggctatggg
actgctgaggaagcgttgctgcgtggaatggatgctatgagtgctgaatttcaatctgcc
aaaaaaaccgtcagcggggaacaacatggtgaagctggtggagagatttacttgccagca
tcttacttgagttccaaggagaagcaactcaagcaaggctaa
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