Lotus japonicus: 130722660
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Entry
130722660 CDS
T04348
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130722660
03036 Chromosome and associated proteins [BR:
lja03036
]
130722660
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130722660
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130722660
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130722660
microRNA pathway
RISC loading complex
130722660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
130722660
NCBI-ProteinID:
XP_057429449
LinkDB
All DBs
Position
6:complement(48703859..48712490)
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AA seq
921 aa
AA seq
DB search
MDSFEPDGNGKEESLPLPPPPPVLPSDVVPLKAEEVLPAAPPPEPVKKKTPARLPIARRG
LGTKGTKIPLLTNHFKVTCTNNDGHFFHYSVNFTYEDGRPVEGKGVGRKIMDKVQETYQS
DLNGKDFAYDGEKSLFTIGSLPRNKLEYEVVLEDVTSNRNNGNCSPPNGHGEDNETDKKR
MRRPYRAKTFKVEISYAAKIPMQAIANALRGQESENFQEAIRVLDIILRQHAAKQGCLLV
RQNFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVQPGPVVDFLISN
QNVRDPFQLDWTKAKRTLKNLRIKTYPSNQEFKITGFSELPCKEQTFSLRKKGDGDDSEE
VTVYDYFVNTRKIELRYSGDLPCINVGKPKRPTFFPIELCELVSLQRYTKALTTLQRSSL
VEKSRQKPQERMNVLTDALKISNYGAEPLLKNCGISISNGFTQVEGRVLPAPRLKFGNGE
DMNPRNGRWNVARMKFVRPTAKVERWAVANFSARCDVQALVRDLMRIADMKGIQMDQPFD
VFAESPQFRRAPPMVRVEKMFEDIQSKLPGAPQFLLCLLPDRKNCEIYGPWKKKNLADFG
IVNQCMCPLRVNDQYLTNIMLKINAKLGGLNSLLSVELSPSLPIVSKAPTLILGMDVSHG
SPGQTDIPSIAAVVSSREWPLISKYRACVRTQSAKVEMIDNLFKQVSEKEDEGIMRELLL
DFYLSSGKRKPDNIIIFRDGVSESQFNQVLNVELDQIMEACKFLDDKWEPKFVVIVAQKN
HHTRFFQPGSPDNVPPGTIIDNKIGHPRNYDFYLCAHAGMIGTSRPTHYHVLLDQAGFSP
DELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSAAG
AVPVPQLPKLQDNVCNSMFFV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtttgaacctgatggtaatgggaaggaggagagtttgccgttgccgccaccg
cctccggttctcccttctgatgtggtacctctaaaagcagaggaggtgcttcctgctgct
ccacctcctgaaccggtgaagaagaaaacacctgcgcgtcttccgattgctagacgtggt
ctgggaactaaagggacgaaaataccgcttctgaccaaccacttcaaagttacttgcacc
aacaatgatggacacttcttccattatagtgtgaattttacctatgaagacgggcgccct
gtagaaggtaagggtgtagggaggaagataatggacaaggtgcaagagacttatcagtct
gacttaaatggcaaggactttgcgtatgatggggagaagagtctgttcactattggctcc
cttcctagaaacaagcttgagtatgaagttgttctggaggatgtgacatcaaacagaaac
aatggcaattgtagccctccaaacggtcatggggaggacaatgagactgacaagaagagg
atgcggcgcccttatcgtgccaagacgtttaaagttgagattagctatgctgccaaaatt
ccaatgcaggccattgccaatgccttacgagggcaggagtcagaaaacttccaagaagcc
attcgagtgctagatatcatattgaggcagcatgcggctaagcaaggctgtctgcttgta
cgtcaaaacttctttcacaatgatcccaaaaactttgctgatgttggaggcggtgttcta
ggctgtagaggattccattctagttttagaactacacagagtggcctgtctctgaacata
gatgtctccactacaatgatagttcaaccaggaccagtggtagacttcttaatttccaat
caaaatgtcagagatccttttcaacttgattggaccaaggccaaaaggacgctgaaaaac
ctgaggattaaaacctacccttctaatcaagagttcaaaattactggattcagtgaactc
ccctgcaaagaacagaccttttctctgaggaaaaaaggtgatggtgatgatagtgaggaa
gttactgtctatgattattttgttaatactcgtaagatagaactccgctactctggtgac
ctgccatgtattaatgtggggaagcctaaacggcccacatttttccccattgagctctgt
gaattggtatccctgcaacgatataccaaagctttgaccacacttcaacggtcctcattg
gtggaaaagagcaggcagaagccacaagagcgaatgaatgttttgactgatgcactgaaa
attagcaactatggtgctgaacctttgctaaagaattgtggaatttctataagcaatggc
tttacccaagtcgagggtcgtgttttgcctgctccaaggttgaagtttggcaatggtgaa
gatatgaatcctaggaatggaagatggaatgtggccaggatgaaatttgtgcggccaact
gcaaaggttgaaagatgggctgtggccaacttttctgcacgttgtgatgttcaagcactt
gtgagagatctaatgagaattgcagatatgaaaggaattcaaatggaccaaccatttgat
gtgtttgctgaaagtcctcagtttaggcgtgccccacctatggttagagtggagaagatg
tttgaggacatccaatcaaaacttcctggggctcctcagttccttctctgtttgcttcct
gataggaaaaactgtgaaatttatggtccatggaaaaagaagaatcttgctgactttgga
atagttaatcagtgcatgtgtcctttacgggtcaatgaccagtatctgacaaatattatg
ctgaagataaatgctaagcttggtgggttgaattcattgttaagtgtggaattgtctcct
tctcttcccattgtttccaaagctcccaccctcattctaggcatggatgtgtctcatggc
tcaccgggacagactgatattccttcaattgctgcggtggtcagctccagagagtggcct
ctgatatcaaagtatagggcttgtgttcgtacccagtctgcaaaggttgaaatgatagat
aacttgttcaagcaagtgtcagaaaaggaagatgaaggcatcatgagggaacttttgctt
gatttctatctaagttctgggaagagaaagccagacaatataatcattttcagggatgga
gtcagtgagtcgcaattcaatcaagtgttgaatgttgagcttgatcaaatcatggaggca
tgtaaatttcttgatgataagtgggagccaaaattcgttgtaattgttgctcagaagaac
caccacacaaggttcttccagcctggctcacctgacaatgtcccacctggaactattatt
gacaataaaattggccatcccagaaattatgatttctacctttgtgcgcatgctggaatg
attggtaccagtaggcctacacactaccatgtgctgctagatcaggctggtttctctcct
gatgaactgcaggagcttgtacacagtctatcatatgtgtatcagaggagcaccactgca
atttctgttgttgctcctatatgctatgcccacttggctgcaacccagttgggccagttc
atgaaattcgaggacaaatctgagacatcatcaagccatggtggactgagtgctgctgga
gctgttcctgtccctcaactgcccaaattgcaggataatgtttgcaactctatgttcttt
gtttga
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