KEGG   Lotus japonicus: 130722689
Entry
130722689         CDS       T04348                                 
Name
(RefSeq) uncharacterized protein LOC130722689
  KO
K12828  splicing factor 3B subunit 1
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130722689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lja03041]
    130722689
   03036 Chromosome and associated proteins [BR:lja03036]
    130722689
Spliceosome [BR:lja03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130722689
 Complex B
    130722689
 Complex C
   U2 SnRNP specific factors
    130722689
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    130722689
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_EF3_N Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd UME Adaptin_N
Other DBs
NCBI-GeneID: 130722689
NCBI-ProteinID: XP_057429488
LinkDB
Position
6:complement(66310801..66315392)
AA seq 1263 aa
MDPEIAKTQEDRKKMEQELASLTSVTFDTDLYGASDRDAYHTSIPANDDDDNLDAIDNEV
ARKLASYTAPKSLLKDMPSAPETDADLGFRKSQRIIDREDDYRQRRLNRIISPERHDPFA
AGEKTPDPSVRTYAEIMQEETLKRKKEETLKLIANKKKEEEEAAKAAPAPPADKADKDKA
AAAQKRRNRWDMSQEDGAAKKAKTSDWEDETTPGRWDATPTPGRVIDATPGRRNRWDETP
TPGRLVDSDATPAGGATPGATPAGMAWDATPKLAGMATPTPKRQRSRWDETPATMGSATP
LPGATPAAAYTPGVTPVGGIELATPTPGQLHGGAITPEQYNLLRWERDIEERNRPLTDEE
LDAMFPMEGYKVLDPPASYVPIRTPARKLLATPTPLGTPGFHIPEENPLQRYDIPKELPG
GLPFMKPEDYQYFGSLLNEDNEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDK
AREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLL
IDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIP
ALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVR
TITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALYA
SYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRTDILPEFFRNFWVRR
MALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGSS
DIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLN
NKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIV
NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFE
LLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAE
TCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRD
LVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVAL
GAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPALEDEHSNVYSRPELM
MFI
NT seq 3792 nt   +upstreamnt  +downstreamnt
atggaccctgagattgcgaagacgcaggaagacaggaagaagatggagcaggaactcgct
tccctcacctccgtcaccttcgacaccgatctctatggcgctagcgacagagacgcatac
cacacttcaatccccgccaacgacgacgacgacaatctcgacgccatcgacaacgaggtc
gctcgcaaactcgcttcctacaccgcccccaaaagcctcctcaaggacatgccctccgcc
cccgaaaccgacgccgatttgggtttccgcaagtcgcagaggattattgatcgggaagat
gattaccgtcagaggaggctcaaccgcatcatctccccggagcgtcatgatcccttcgcc
gccggtgagaagacgccggacccctctgttaggacctacgctgagatcatgcaggaggag
acgctgaagaggaagaaggaggagacgctgaaattgattgctaacaagaagaaggaggag
gaagaggctgccaaagctgcacctgcacctcctgcggataaggcggataaggataaggcg
gcggcggcgcagaagaggaggaataggtgggatatgtctcaggaagatggggcggcgaag
aaggcgaaaacctctgattgggaggacgagaccacgcctgggcggtgggatgccactccg
acgccggggagagtgatagatgcgactccagggaggaggaataggtgggatgagactcct
acacctggtagattggtggattctgatgctacacctgctggtggtgctactcctggtgct
acccctgctggaatggcttgggatgctaccccgaagcttgctgggatggctactccaact
cctaagcggcaaagatcaaggtgggatgaaacacctgctactatgggcagtgctactcct
ttgcctggtgccactcctgctgctgcttacactcctggtgttacccctgttggtgggatt
gaacttgctaccccaactccggggcaattgcacggtggtgccatcactccggagcagtac
aatcttttgaggtgggagagggatattgaagagaggaatcgtccattgactgatgaagag
cttgatgctatgtttccaatggaagggtataaggtgctggaccctcctgcttcctatgtg
ccaatcaggacacctgcgaggaagcttcttgctactccaactccgttggggactcctggt
tttcatatccctgaggagaatcccctgcaacggtacgatattccgaaggaattgcctggt
ggtttgccgttcatgaagcctgaggactaccagtattttggatcactgttgaatgaagat
aatgaagaggagttgtcaccggatgagcagaaagagcggaagattatgaagcttcttctg
aaagtgaagaatgggacacctcctcagaggaaaactgcgttgagacagcttactgataag
gctcgtgagtttggtgctggcccattgtttaaccggattctgccgttgctcatgcagcct
actctggaggatcaagagagacatcttttggtcaaggtaattgatagagttctgtataaa
ttggatgaattggttcgcccttatgtgcataagattcttgttgtgattgaacccttgttg
attgatgaagactactatgcccgtgtggaggggagggaaatcatatctaatcttagcaaa
gctgctgggctggccacaatgattgctgctatgcggcctgacattgacaatattgatgag
tatgttaggaacactactgctagagctttcagtgttgttgcttctgctcttggtattcct
gcattgttgcctttcctgaaggctgtctgtcaaagtaagaaatcatggcaagctcggcac
acggggattaaaattgtgcagcagattgccattttgattggttgtgctgtactgccccat
ctgagatctcttgtggaaattatagaacatggtttgaatgatgagaatcagaaggtgaga
acaattactgcgctgtctcttgctgctcttgctgaggctgctgctccttatggcattgaa
agttttgactctgtgttgaagccactgtggaagggtattaggcagcaccgtgggaaggtg
ctggctgcgtttttgaaggcaattgggtttattattccattgatggaagccctttatgct
agttactatactaaggaggtcatgcttattttgattcgtgaattccagtcacctgatgaa
gaaatgaagaaaattgtcctgaaagtggtgaagcagtgtgtgagcaccgagggtgtggaa
gctgattatattagaactgatattcttcctgaatttttcaggaacttctgggtcaggagg
atggctttggatagaaggaactacaagcaactcgtggagacaacagtagagatagccaac
aaagttggtgttgctgatattgttggaagaattgtggaagatcttaaagatgagagtgaa
ccttataggcgtatggttatggaaactattgagaaggtggtcactaacttgggatcatct
gatatagatgcacggttggaagagcttttgatagatggtattctctatgccttccaagag
cagaccagtgatgatgctaatgtgatgctcaatggatttggtgcagtagtgaactcgctt
ggccagagagtgaaaccatatcttccacagatttgtggtaccatcaagtggcggttaaac
aacaagagtgcaaaggtgagacagcaagctgcggacctcatctcaaggattgctgttgtc
atgaagcagtgccatgaggaacagctgatgggtcatcttggtgttgtcttgtacgagtat
ttaggagaagagtatcctgaagttttagggtcaattctgggagctctcaaatcaattgtc
aatgttattggtatgacgaagatgactccgcctattaaggatttgcttcccaggttaact
ccaattttgaagaataggcatgagaaagtccaggagaactgtattgaccttgtgggtagg
attgccgatcgtggggctgagttcgtacctgcaagagaatggatgaggatctgttttgaa
cttcttgagatgcttaaggcacataagaagggaattcgtagagcgacggtcaacactttt
ggatatattgcgaaggccattggaccacaagatgtcctggcaactctattgaacaatcta
aaggtgcaggagaggcagaaccgtgtctgcacaactgtggcaattgcaatagttgcggaa
acatgttcacccttcacagttttgccagcattgatgaatgagtatcgtgtgccagagctt
aatgtgcaaaacggtgttctcaaatccctgtctttcctctttgagtacattggtgaaatg
ggtaaggactacatctatgcggtgactcctctgcttgaggatgctcttatggacagggac
ttggttcataggcagacagctgcttctgccgtgaagcacatggcactgggagtggctggt
ttgggttgtgaagacgcgctggtccatttgctgaactatgtctggccaaacatttttgaa
acttctccacatgtgatcaatgctgtgatggaagcaattgaagggatgagggtagctttg
ggtgctgctgttgttcttaattactgtctccaagggctgttccaccctgctagaaaagtg
agggaggtgtactggaagatctataactcactctatattggagctcaggatgctcttgta
gcagcataccctgccttggaggatgagcacagcaacgtatacagtagaccagagttgatg
atgttcatctag

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