Lotus japonicus: 130722734
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Entry
130722734 CDS
T04348
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
Organism
lja
Lotus japonicus
SSDB
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Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT
BRCT_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-rbx1
PHD_NSD
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130722734
NCBI-ProteinID:
XP_057429544
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Position
6:complement(63054193..63059832)
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AA seq
1179 aa
AA seq
DB search
MGDLERMGRELKCPICLSLLDSAISLTCNHLFCNSCILKSMKSASACPVCKIPFTRREVR
PAPHMDNLVTIYKNMEAASGITMFVTQNNLPPIKSSDEEKRCEGDDDSGKKEAGGTIEND
ARGENTLERKKSRKNTKTSVESSGSDIAKPSFPAKKRVQVPQNILSETPLKDLKLGGPLS
EIDREGTERASVVANIRPHQTQKDDNLLTPFFWLREEENNDKLSQRSNEDQFIDGPTPVP
PSFSDLKDSDDENPSEVAPLDEVQNKTSVDLFDSEMFEWTQRPCSPELFSSPVKMQVEDS
VEIDETQEELTAASEKLETNKLSADAGNALSENLKEGNKLADVLPSGVSSPQVKSSDVLN
AIKKPTKRSRKPRGKAMQKQIGEQKILIDGMDAVQNVPLKVARKQASDNKHSRRGKRVCF
STHIDENQEDSPSEKLETSKLSADAGKEGNKLADVLPPSVSSPQIQSSDVLSGINKSANR
SRKARGKAMQVEENQEELVAASEKLETNNLSADAGNSLAQNQKEGNKLADVLPPNVSSPQ
IKSSDVVLNGIKQSTKRSRKARGKVMQEQIGEQQNAIDGVDVDPNMPLKVTMEQSSDNKH
KSSNLGKSIRRGKTVCFNTSINPTPQTTCTVSNNSGVLSDGELKMAKISRTSPSKQENEK
HCPQELVGRHHLKRSGKQKLDYVQVLAEDLSSTQSPTNEFAGSDSSLQMYSSEKASNSRQ
RKNKISRKSSSCSKESRSTKKLKLSSDCISKTKTGEEIQPNESILQGPDAGVLSETSKEK
HRPLMDERILRRCESHVKKYQCVFCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCH
RSCTEWAPNVYFEDDNAINLEAEISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKW
TSQCRWDMENFVMLCPLHASSKLPNESSGSQERSKKGTGEGKSRGFKHDTKSQTRTAHGS
YKKIILCCSALSMQEKDVVSEFERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLG
ILEGKWILNIDWIKACMKEMEPVDEESYEINLDIHGIRDGPRLGRLRVLNKQPKLFDGYK
FYFMGDFMPSYKGFLQDIVIAAGGLVLHRKPVLADHPHQTLIIYSLELPNKCNPSEKDTI
FSRRRSDAEVLASSTGSKVASNTWILNSIAACKLQCLAQ
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatctcgagagaatgggtagagaactcaaatgccccatctgtttgagtttgctc
gattccgcgatttcactcacctgcaatcatcttttctgcaactcatgcatactcaaatct
atgaaatctgcatctgcttgtcctgtctgtaaaatacccttcacccgtcgagaggttcgc
cctgctcctcacatggacaacttggtcaccatctacaaaaacatggaagctgcttctgga
atcaccatgtttgtcacccagaataatctacctcctatcaaatcatcagatgaagaaaag
cgatgtgaaggtgatgacgactctggtaagaaggaagctggtggaactattgaaaatgat
gcaaggggggaaaataccctcgagagaaagaagtcaaggaagaatactaagaccagcgtc
gaaagttcaggttctgacattgcaaaaccttcttttccagctaagaagagggtccaggtg
ccacaaaatattctttcagaaactccattgaaggatttgaaacttggaggacctcttagt
gaaattgacagggagggaacagaaagggcttcggtagtggcaaacataaggccacaccaa
actcaaaaagatgataatcttcttacacctttcttttggttaagagaggaggaaaacaat
gataagttaagtcagcgctccaatgaggatcaatttattgatggcccaacaccagttcct
ccttcattcagtgatctcaaggactctgatgatgaaaacccttctgaagtggctccatta
gatgaggtgcaaaataaaacatctgttgatttatttgatagtgagatgtttgaatggaca
caaaggccatgctcccctgaattattttcaagtcccgtcaaaatgcaggttgaggatagt
gttgagattgatgaaactcaagaggaattgacagcagcctcagaaaagctggaaacaaat
aagttaagtgctgatgctggcaatgcactatctgagaatctcaaagaaggaaataaattg
gctgatgtgttaccatcgggtgtgtcttctcctcaagttaaaagttctgatgttctaaat
gcaataaagaagcctacaaagagaagcaggaagcccaggggaaaagctatgcaaaagcag
attggggaacaaaaaatcttaattgatggaatggacgctgttcaaaatgtaccattgaaa
gttgctaggaagcaagcatcggacaataagcacagtagaaggggcaagagggtgtgcttc
agtactcatattgatgaaaatcaagaggattcaccatctgagaagttggaaacaagtaag
ttaagtgctgacgctggcaaagaaggaaataaattggctgatgtgttaccaccaagtgtg
tcttctcctcaaattcaaagttctgatgttctaagtggaataaacaaatctgcaaataga
agcaggaaggccaggggaaaagctatgcaggttgaggaaaatcaagaggaattggtagca
gcctcagaaaagctggaaacaaataacttaagtgctgatgccggcaattcactagctcag
aatcagaaagaaggaaataaattggctgatgtgttaccaccgaatgtgtcttctcctcaa
attaaaagttctgatgttgttctaaatggaataaagcagtctacaaagagaagcaggaag
gctaggggaaaagttatgcaagagcagattggtgaacaacaaaacgcaattgatggagtg
gacgttgatccaaacatgccattaaaagtcactatggagcaatcatcggacaataagcac
aaatcttctaacctggggaagtctattagaaggggcaagacggtttgctttaataccagt
ataaatccaacacctcaaactacttgtacagtctccaataactcaggagttctaagtgat
ggtgaattgaagatggctaagatttcacgtacctcaccgtctaaacaagaaaatgagaag
cattgtcctcaggagcttgttggaagacaccacctgaaaagatctggaaaacaaaagctg
gactatgtgcaggtactagctgaagatttatcttcaacgcaaagcccaaccaatgagttt
gctggttctgattcatctctgcagatgtatagtagtgaaaaggcctctaatagcaggcag
aggaaaaacaaaatttccagaaaatcttcatcttgcagtaaagaatcgaggagtactaaa
aagttgaaactttcctctgattgtatctctaagactaaaactggtgaagaaattcaacct
aatgaaagtattctgcaaggtccagatgccggcgttttgagtgaaacatcaaaagagaaa
catcgtcctttgatggatgaaagaattttaaggagatgtgagagccatgttaagaagtac
caatgtgttttttgtctcttatcagaagaatcagaggcttctggaccaatggtgcattat
tttgatggcaagcctgtacctgcagattatgaaggaggatctaaagtcatacattgtcac
aggagctgtacagaatgggcccccaatgtatattttgaagatgataatgcaataaatctt
gaagctgaaataagtagaagtcgaaggatcaaatgtagtttttgtggaactaaaggggct
gcactcggctgctatgagaaaagttgccgtaagagttttcatgttccttgcgccaagtgg
acttctcaatgtcgctgggatatggaaaactttgtcatgttatgccctctacatgcttcc
tccaagttgcccaatgaaagttcaggatcccaagaaaggagcaagaaaggcactggagag
ggtaaaagccgtggtttcaaacatgacactaaaagccaaactcggactgctcatggatca
tacaagaaaatcatactgtgttgttctgctctatccatgcaggagaaggatgttgtttct
gaatttgaaagagcaaccaaagttacagttttgaaaaattgggattcaagcgtcacccat
attatagcagcagtagatgaaaatggggcatgcagaaggaccctcaaagtattattgggc
atcctggagggaaaatggattctcaatattgattggatcaaggcttgcatgaaggaaatg
gaacctgttgatgaggagtcttatgaaattaaccttgatatccatggaatcagggatggc
cctcggcttggaagacttagagttttgaacaagcaaccaaagctttttgatggctacaag
ttctatttcatgggagattttatgccgtcatacaagggctttctgcaagatatcgtgatc
gctgctggagggctagttctgcatagaaaaccagtgctagctgaccatcctcaccaaacc
ctcataatttacagtcttgagcttcctaataaatgcaatccttcagaaaaggatacaatt
ttcagcagaagacgaagtgatgcagaagttctggcaagttctacaggttcaaaggttgca
agtaatacatggattcttaattcaattgcagcctgcaagctgcaatgccttgctcaataa
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integrated database retrieval system
