Lotus japonicus: 130722888
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Entry
130722888 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130722888 isoform X1
KO
K13095
splicing factor 1
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130722888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130722888
Spliceosome [BR:
lja03041
]
Complex A
Other components
Complex A specific factors
130722888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_1
SF1-HH
CCDC53
Motif
Other DBs
NCBI-GeneID:
130722888
NCBI-ProteinID:
XP_057429741
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Position
6:complement(7424860..7431697)
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AA seq
785 aa
AA seq
DB search
MIAEFDPTSALEPHKMSRASSAALTSGQKPSKFAAKSGFVIPKNKLSGSLVPVFRGAKKH
GVTGGAVNEESLKQIERVTKWGPDLTQDASVKRAKAMALQIRVDQITKQLESEELQIGDT
QNLPIASENPNQSTSGSDMNSKKSEMLELEKREAIGEILKLDPSYKTPPGFKPLLKEASI
PLPVQEHPGHKFIGLIYGPEGDTQKRLEKETGAKIKIHGTRADTGDKGEIKPGTDIQCSY
QEMHVNISADSFDKVDAAVSIIELLLSSITGNSAAVSTPVSVSGDSTNVPSQSQDAPPSN
AVSLPSENQAVLQPAAVTQMHGDHFQYPGPWFSVAPSHTPLGAASGSSVPPYPPGRTPHF
PSQTMTPSNMVSTFGAQPVPVPGFPGFRPMFPNHHVSMQALPPRPMLQHSHMNQASPLGH
IVPPRNPSSVPVQNFSAPTNASVSFQVTLSQPTPIGHLQTPVSSMPQPMSGISPSPMPNQ
PLTPLGVSPRQSGGPVSLSNLGPMAPPAVPPTRPVSLGQSATFSQHQSGISPGPPSSLGS
MAPAPTYSSRPVSFPSPRMSPSNPLPQQSGTPNSFSGVTPYQAHATPLVLTTSNSGNFTF
QSQRPNADYSQVASRPNSQATAEGGIQEPSSGPRPPPFGFSVPDQRLQMFPRTQSPSQVD
QTQAHLFNLPFGGRSGSVSIPPRHTTFPYAGQPGPRSPAPQMGMQNFISAPQRPNFPTPG
VQGGMHIRQNYPQRAWPDIPMPLNQKFGNNHPMASGKPAYLADQIYDPFSPTSVAPPQQK
GNNGK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggagtttgatccaacatctgctcttgagcctcacaagatgtctagagcttca
tcggctgcacttacgagtggccaaaagccatctaagtttgctgcgaaatctggatttgtc
atccctaaaaacaaattatcagggtcattggtcccggttttccgaggggctaaaaaacat
ggggtcaccggaggagccgtcaatgaagaaagtttgaaacaaattgagagggttacaaaa
tggggacctgatctgacacaagatgcttctgtcaagagagcaaaggctatggctctgcag
attcgagtggatcagattacgaagcagttagaatcagaagaattacaaattggggacact
caaaacttgccaatagcttctgagaacccaaatcagagcacatctggctctgacatgaac
agcaagaagtcagaaatgctcgaacttgaaaaacgggaagcaataggtgaaatactaaaa
ttagatccaagttacaagactccacctggttttaaaccattgttaaaagaagccagcatt
cctttacctgtccaagaacatcctgggcacaaatttattggtctaatatatggacctgaa
ggtgatactcaaaagcgactagaaaaggaaactggtgcgaagataaaaattcatggaacc
agagcagatacaggagacaaaggtgaaattaaaccaggaactgatatccaatgcagttac
caagagatgcatgttaacatatcagctgatagtttcgacaaagtcgatgcagcagtgtcc
atcattgaactactacttagctctataactgggaattcagctgctgtttccacacctgta
tctgtttctggggatagcactaatgttccgagccaaagccaagatgcccccccttctaat
gcagtttctctgccttcggaaaaccaggctgtgttgcagccagcagctgttacacaaatg
catggagaccattttcaataccctggtccatggttttcagtagctccatctcatacccct
ttaggtgctgcttctggcagttcagtccctccatatccaccaggtagaacaccccatttt
ccatcacaaacaatgactccttcaaatatggtttctacttttggtgctcaacctgtaccg
gttcctggattccctggattccgccctatgtttccaaatcatcatgtttctatgcaagca
ctaccacctagaccgatgttacagcattcacatatgaatcaagcaagtcctttgggtcac
attgtgccgccaagaaatccttcttcagtacctgtacagaatttttcagctccaacaaat
gcctctgtttcatttcaagttactttaagccaaccaacaccaataggacacctccagaca
ccagtgtcttcaatgcctcaacctatgtctggtatatcaccatcaccaatgcctaaccag
ccattgacccctcttggggtatctcctagacagagtggaggtcctgtaagtctcagcaat
ttgggaccgatggctccaccggcagttcctcctacaagacctgtttctctaggtcaatct
gccactttttctcaacatcaatcaggaatttccccaggaccgccatcatctttaggatca
atggctcctgcacctacttactcatcaagacctgtttcgtttccatcgccacgaatgtcg
ccttcaaatccattaccgcagcaatccggaacacctaattctttttctggggtcactcct
tatcaagcccatgcaacaccactagtcttgacgacttcaaattcaggaaattttactttt
caatcacagaggccaaatgcagactatagtcaagtggcttccagaccaaacagtcaagct
actgctgaaggtggcatacaagagccatcttctggtccacgtccaccaccatttgggttt
tctgtgcctgatcagcgtcttcaaatgttcccccggacacaatcccccagccaggtggat
caaactcaagctcatttgtttaatcttccctttgggggaagatcaggttctgtctcaatt
ccaccccgacacaccacatttccctatgctggtcaacctggacctagatccccagccccc
caaatgggtatgcagaacttcatttctgcccctcaaagaccaaactttcccactcctggt
gtccaaggtggcatgcacattcgacaaaactatcctcagagggcatggccagatatccca
atgcctttgaatcagaagtttggaaacaatcaccccatggcttctggtaagcctgcttat
cttgcagaccaaatttatgatcccttctcacccacatctgttgcacctccacaacagaaa
ggtaataatggaaaatga
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