Lotus japonicus: 130722901
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Entry
130722901 CDS
T04348
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130722901
04121 Ubiquitin system [BR:
lja04121
]
130722901
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130722901
Membrane trafficking [BR:
lja04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130722901
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130722901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_5
DUF3330
Prok-RING_1
FAR1_N
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
130722901
NCBI-ProteinID:
XP_057429768
LinkDB
All DBs
Position
6:complement(11597834..11599909)
Genome browser
AA seq
396 aa
AA seq
DB search
MMSSGTSSYWCYRCSRFVRVFRQDTVACPDCESGFIEEVDHPAARSVHADSRRRRFPAAA
MYMIGQRPGSDQTSRPSGLRRTRRNGGERSPFNPVIVLRGAAAAAEEGESRGFELFYDDG
SGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDSG
HLAMESHCAVCKEAFEMGASVREMPCKHIYHPECILPWLALHNSCPVCRHELPVDAAPSP
QPAPVTGQSVPVSEEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNG
GGEPRRISWSSRGSRGRESGGFGFGLGRMFRNLFGCFRGGSGGGGDGGVGTATQRSTSTR
ESRSLRASSSRSSTRDPSPRSRRTWSMDVNSGMRAW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttctgggacatcttcatattggtgctacaggtgcagtcgctttgtgagggtg
tttagacaggacacggtggcatgccctgattgcgagagtggatttattgaagaggttgac
catccagcggcgcgttctgtccacgcggattcccgccgccggaggtttcctgctgcggcg
atgtacatgatcggccaacgtcccggttctgatcagacttcgcgtccctctggtttgcgc
cgaacgcgccgtaacggtggtgaacggtcgccgtttaatccggtgattgtcctccgcggc
gccgccgccgccgcggaggaaggggagagtcgagggtttgagctgttttatgatgatggg
tctggttctggtcttaggcctctgccgccgagcatgtctgagtttcttctgggatctggg
tttgataggcttctggagcagctttctcagattgagattaatggtattgggaggtatgag
catcctccggcgtcgaaagcggctatcgattcgctaccgacgattgagattgattcgggt
catttggctatggaatctcattgtgctgtttgcaaggaggcttttgagatgggagcttcg
gtgagggaaatgccttgtaagcatatatatcatcctgaatgtattttgccgtggctcgcg
cttcataattcttgccctgtttgtcgccatgagttgcctgttgatgctgctccgagtcca
caaccggcaccggtaacagggcaatctgttcctgtgagtgaggaggagaatgtggggttg
acgatttggaggttgcctggtggtggttttgctgtggggagattttctggtgggaggaga
ggggctgagagggagcttcctgttgtatacactgaaatggatggtgggtttaacaatggg
ggtggtgagccgaggaggatttcttggtcttctagagggagtagagggagggagagtgga
gggtttgggtttggtttggggaggatgtttcgaaatttgtttggttgcttcagaggtggt
agtggtggtggtggtgatggaggagttggaacagcaacgcagcgctctacttctactaga
gagtctcggtcattgagggcgagttcatctcgttctagtactagggatccttcaccgcga
tcacgcaggacttggtctatggatgtcaatagtggaatgagagcatggtaa
DBGET
integrated database retrieval system
