Lotus japonicus: 130723031
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Entry
130723031 CDS
T04348
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
lja
Lotus japonicus
Pathway
lja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130723031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130723031
03032 DNA replication proteins [BR:
lja03032
]
130723031
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
130723031
Prokaryotic type
130723031
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
130723031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
130723031
NCBI-ProteinID:
XP_057429933
LinkDB
All DBs
Position
6:66255607..66257660
Genome browser
AA seq
584 aa
AA seq
DB search
MSLSETKKKKHRSATKTHDGAATTEDDHHTKDEPQFMIKPEKLTPTIDTSQWPILLKNYD
RLNVRTGHYTPLPSGYSPLKRPLPEYLKYGVLNLDKPANPSSHEVVAWIKRLLRVEKTGH
SGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSDVPDVSKVARALETLTGAV
FQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLVLGVG
AHMQELRRVRSGIMGEKDNMVTMHDVIDAQWVFDNYRDESYLRRVVMPLEVLLTSYKRLV
VKDSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDH
GVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIAAGKLDKHGKPNESTPQEWMRNLVLPA
GGDSMIAGLAAAAPEADEAKKGIAVEEGKKDGDGEGRKRKKHESTDSPASVPAKKVKVDV
VVDEGKVKVEVEGEKKEKKKKKKKDKENGEVASSDEEKAGKEKKKKHKVKVEDGSPDLDK
SEKKKKKKKDKDAEDNAAEISNGKEDSKSEKKHKKKKNKDAEEE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctccgagaccaagaagaagaagcaccgcagcgccaccaaaacccacgacgga
gccgccaccaccgaagatgaccaccacaccaaagacgaaccacagttcatgatcaaaccc
gagaagctcacacccaccatcgacacctcccagtggcccatcctcctcaaaaactacgac
cgcctcaacgtccgcaccggccactacacccctctcccctccggctactcccctctcaaa
cgccccctcccggagtatctcaaatacggcgtcctcaacctcgacaagcctgctaaccct
tcctcccatgaggtcgtcgcctggatcaaacgcctactccgcgtcgagaaaaccggccac
agcggcactcttgaccccaaggtcaccgggaatctcattgtctgcattgacagggccacc
cgccttgtgaagtcgcagcagggtgctgggaaggagtatgtctgcattgcccgacttcac
tctgatgttcctgatgtttccaaggttgctcgcgccctcgagacgctcaccggtgctgtg
tttcaacgcccgccgttgatctctgctgtcaagcgccagctcaggatcaggaccatttat
gagagtaagcttcttgagtatgaccctgataggcatttggttgttttttggatttcatgt
gaggctggtacctatgttaggaccatgtgtgttcatttgggtttggttcttggcgttggt
gctcatatgcaagagcttaggagggttaggtctgggatcatgggtgagaaggataacatg
gttactatgcatgatgttattgatgctcagtgggtttttgataattatagggatgagagt
tatttgagaagggttgttatgcctttagaggttcttttaactagctataagaggttggtt
gtgaaggattctgctgtgaatgctatctgttatggtgccaagttgatgattcctggcttg
ctgaggtttgagaatgatattgaggcaggggaggaggttgtgcttatgaccaccaagggg
gaagctattgctcttgggattgctgagatgactactgctgtgatggcgacttgcgatcac
ggtgtggttgctaagatcaagagggtggtgatggatagagatacctatcccaggaagtgg
ggtttgggccctagggcttcaatgaagaagaagctgattgctgcggggaagctggataag
cacgggaagccgaatgagagcactccccaagagtggatgaggaatctggttttgcctgct
ggtggggatagcatgattgccggtttggctgctgctgctcctgaagctgatgaggcgaag
aaaggcattgctgtagaagagggtaagaaggatggagatggggaagggcgtaagaggaag
aaacatgaaagcactgatagccctgcttctgttccggctaagaaagtgaaagttgatgtg
gttgtagacgaagggaaagtaaaggtggaggttgagggtgagaagaaagagaagaagaag
aaaaagaagaaggacaaagagaatggtgaagtggcatcttcagatgaggagaaagctgga
aaggagaagaaaaagaagcacaaggtaaaggttgaagatggttcaccagatttagacaag
tctgagaagaaaaagaagaagaagaaagacaaagatgctgaggataatgctgctgaaatt
agtaacggaaaggaggacagtaagagcgaaaagaagcataagaaaaagaaaaacaaggac
gcagaggaagaataa
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