Lotus japonicus: 130723032
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Entry
130723032 CDS
T04348
Name
(RefSeq) KH domain-containing protein At4g18375-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130723032
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130723032
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
PLDc_2
Motif
Other DBs
NCBI-GeneID:
130723032
NCBI-ProteinID:
XP_057429934
LinkDB
All DBs
Position
6:62967737..62973142
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AA seq
655 aa
AA seq
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MGETGKRYRPRRDHDGGSKNQKRRVNNKDERGDDELIVYRILCPDEAIGGVIGKKGKVIN
SIRQETRAKVQVVDPFPGATYRVITIYCYVKEKEEIEVDDELNNKRTLCAAQDALLKVHS
AISNAKETVRDSEKKQKEKEECQILVPSSQSANIIGKAGATIKRLRVKTRTNIKVIPKDA
ADPAHSCAMEFDNFVLITGESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPEIPPSIIFP
SEVPMYPSGGLYPATNVHDLQGYSDAGGNTPSLYSSSFPIVSSLGASQSEELIVRMVCPS
YKIGRVIGKGGGTIKSVRQASGARIEVDDSKAYDECLITITSTESSSDLKSIAVEAVLLL
QEKINDEDDTTVSIRLLVPSKVIGCIIGKGGSIINEIRKRTRADVQISRNDKPKCGDVND
ELIEVVGEVDSVRDALIQIVLRLREDVLKERDIGHYPPRGAESYYSESSVLSVPSLLPSV
PSVTAPLAYDQRPDSRTGLGMLSSNSLYGYGSYSMGESGYGSMQSYASKLYEGLPPLSTL
EMLVPANAVSKVLGKGGTNIANIRKVGTHVLILTNIHNFLQMLLLFTGVNFQKQLTVISG
KKYKYEKKKPISCIRILSISRTGPKLKQLNTLTMTFLPSLPLHPSMTDSLLSPFL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagactggcaaaagatatcgaccgcggagagaccatgacgggggaagcaaaaat
cagaagaggcgtgtgaataacaaagatgaaaggggtgatgatgaattgattgtgtatagg
atactctgtccggatgaagcgattgggggtgttattggtaagaagggaaaagtgataaat
tcaataaggcaagagaccagggcaaaagtccaggttgtggatccatttcctggtgccacg
tatcgagttataactatttattgctatgttaaagagaaggaagaaattgaggttgatgat
gagcttaacaacaagaggactctttgtgccgcccaagatgctcttctcaaggttcattct
gcaatttcaaatgccaaggaaactgtaagggattctgaaaagaaacaaaaagaaaaggaa
gaatgtcaaatccttgttccatcaagccagtctgcaaatatcattggcaaggctggggct
accattaaaagactgagagttaagactaggaccaatatcaaggtcattccgaaggatgca
gctgacccagcacactcatgcgctatggagtttgacaattttgtgttgattaccggtgaa
tcagaagcggtaaaaagagcattatttgcagtttcaactattatgtacaagttctccccc
aaggaggacattcctcttgacacaactgtaccagaaatccctcccagtattatctttcct
tctgaagttccaatgtatccatctggtggactatatccagctacaaatgtacatgatctg
caaggttattcagatgcaggaggaaatacaccgtctctttattcatccagttttccaata
gtttccagtcttggtgcttctcaatctgaagaattaattgtaagaatggtatgtccctct
tacaagattggacgtgtcattgggaagggaggaggtaccattaaaagtgtgaggcaggca
agcggtgctcgtattgaggttgacgattccaaggcttatgatgagtgcttaatcactata
acttcaacagagtcatcaagtgatctgaaatccatagctgttgaagctgttctactgttg
caagagaagataaatgatgaagatgataccacagtttcaatccgactcctggtaccatcc
aaagtgataggctgtattatagggaaaggtggttcaatcataaatgaaattcggaagaga
actagggctgatgttcaaatctcaagaaatgataaacctaaatgtggagacgtgaatgat
gaattgattgaggtagttggagaagttgattctgtgagagatgcactcatccagattgtc
ttaagactgagagaggatgtattgaaagaacgggacattggacactatccccctagaggt
gctgaatcctattattcagaaagttctgttctttcggtgccatctttgctgccttcagtt
ccttctgttactgctcctctagcttatgatcagaggcctgatagtagaactggtctgggc
atgctttcttccaacagcctttatggatatggatcttattcgatgggagaaagtggctat
ggatcaatgcaatcatatgcctccaagttgtatgaaggtctgcctcccctgtcaacattg
gagatgttggttcctgctaatgcagttagtaaagtgttgggtaaaggagggacaaatata
gccaatataaggaaggttggtacccacgttctaattttgacaaacatacacaattttctg
caaatgctactgttatttacaggagtgaactttcaaaaacagctgacagtgatatctgga
aagaaatacaagtatgaaaaaaaaaaaccaataagctgtataagaattctctcaattagc
aggactgggcccaagctaaagcagttaaatacattaacaatgacttttctgccctctctt
ccccttcacccctctatgaccgattctcttctttcaccatttctgtaa
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