KEGG   Lotus japonicus: 130723264
Entry
130723264         CDS       T04348                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130723264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    130723264
   03041 Spliceosome [BR:lja03041]
    130723264
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130723264
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130723264
Spliceosome [BR:lja03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    130723264
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 130723264
NCBI-ProteinID: XP_057430226
LinkDB
Position
6:complement(4621866..4624172)
AA seq 352 aa
MASRKLDNPHSGDGASPGKIFIGGLAKDTTLDTFVKYFEKYGEITDSVIMKDRHTGRPRG
FGFITYADPAVVDHVIQENHIINGKQVEIKRTIPKGSSQSNDFKTKKIFVGGIPTSVSED
ELKGFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDNEKVVDTILTDGNMIDMAGTQVEIK
KAEPKKSSNSGSLPPFASDSRPRSYNDGFSGFADSYGSFGSGGYGPGSYRSLYGGRLGDY
GGYGTDDFSGSFGSYGAGAGAGSGGYAGRYGESSFGYSGRYGSYMGGLGGGYGGGGLGAY
GRGGGAYGSYGGPGTGEGFDGPGAGYGGAGGGMYAGSRAGYGGSSRYHPYAR
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcttctagaaagctcgataaccctcactccggcgacggtgccagtcccgggaaaatc
ttcatcggagggttagccaaggacaccaccttggatacgttcgtgaagtactttgagaaa
tacggagagataaccgactctgtgatcatgaaggatcgacacacgggtcgacccagggga
ttcgggttcatcacgtatgcggatcctgctgttgtagaccatgtcattcaggagaatcat
atcatcaatggcaaacaggttgagatcaagaggactattccaaagggttcttcgcaatcg
aatgacttcaagacgaagaagatttttgttggtggtattccaacttcagtatctgaagac
gagcttaagggcttcttctcaaaatatgggaaggttgtggagcacgagataattcgcgac
cacaccacgaaaaggtcccggggatttgggtttatagttttcgacaatgagaaggttgtt
gataccattttaactgatgggaacatgattgacatggctggtactcaggttgagatcaag
aaggctgaaccaaagaaatcctcgaactctggttctcttcctccatttgctagtgactct
aggccacgttcttacaatgatggtttcagtggatttgctgattcttatgggagttttggc
agtggcggttatggccctggatcttataggtcactttatggtggtaggcttggtgattat
ggtggttatggaactgatgacttcagtggtagttttgggagctatggtgctggtgctggt
gctggttctggtggctatgcaggccgctatggagagtcatcttttggatactcaggccgc
tatggatcttacatgggcggtcttggtggtggatatggtggtggtgggttaggcgcctat
ggaagaggtggtggggcttatggaagttatggtggtccaggcactggtgagggttttgac
ggccctggtgctggttatggtggggcaggaggaggaatgtatgctggtagtagggcaggt
tatgggggcagtagccgttaccatccttatgcaagatag

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