Lotus japonicus: 130723278
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Entry
130723278 CDS
T04348
Name
(RefSeq) DNA repair protein XRCC3 homolog
KO
K10880
DNA-repair protein XRCC3
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130723278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130723278
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
130723278
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
AAA_25
RecA
AAA_22
AAA_16
AAA
AAA_24
DnaB_C
NACHT
ABC_tran
TPP_enzyme_C
DUF7125
nSTAND3
Motif
Other DBs
NCBI-GeneID:
130723278
NCBI-ProteinID:
XP_057430249
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Position
6:complement(3953527..3954508)
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AA seq
278 aa
AA seq
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MRAENLLQQRTEKCTLGCPVLDRFLRGGVPCNSVTELVGESGSGKTQLCLQLALSAQSTL
YIYTEFPFPIRRLHQLSQRAAVDDPRSPSFDPCDSVFLRSVSSANELLRIFPQIEDFLSF
RRTRLPVSVIVVDSIAALFRSEFDNNAVDLRRRSSLFFKISGELKSLAKRFGLAVVVTNQ
VVDLIGDEMMMMNSNNEMCTSGRRVCPALGLAWANCVNSRVFLSKEVDDGGDGGVTRTRK
LSVVFAPHLPQSSCQFVITGDGVFGVDHQTLQGRGANV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagagaatctgttgcagcagcgaacggagaagtgcaccctggggtgtcccgta
ctggatcgcttcctccgcggcggcgtaccctgcaactccgtcactgaactcgtcggcgag
agcggttccggcaagacccaactctgcctccaactcgccctctccgctcagtccaccctc
tacatctacaccgagttccctttccccatccgccgcctccaccagctctcccaacgcgcc
gccgtcgatgatccccgttctccctccttcgacccctgcgacagcgtcttcctccgaagc
gtcagctccgccaacgaactcctccgcatcttcccccaaatcgaggacttcctttccttc
cggcggacccggttgccggtgagtgtcatcgtggtggactcaattgccgccctcttccgc
tccgaattcgacaacaacgccgtggacctccggcgaaggtcgtcgctgttcttcaaaatc
tccggggagttgaaatctttggcgaagaggtttgggttggcggtggtggtgacgaatcag
gtggttgatttgatcggtgatgagatgatgatgatgaacagtaacaacgagatgtgtacg
tcggggagaagggtttgcccggcgcttggtctggcgtgggcgaactgcgtgaactcgagg
gtgttcttgtcgaaggaggttgacgacggcggcgacggtggagtcaccaggacgaggaag
ctcagtgttgtgtttgctcctcacttgcctcaatccagttgccagtttgtcatcaccgga
gatggcgtttttggtgtagatcatcaaaccctacaaggaaggggagccaatgtgtaa
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