Lotus japonicus: 130723351
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Entry
130723351 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130723351
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130723351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130723351
Spliceosome [BR:
lja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
130723351
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
130723351
NCBI-ProteinID:
XP_057430337
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Position
6:complement(63811714..63816164)
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AA seq
559 aa
AA seq
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MGSKRERETGNRKEEEEGLHSDLRRQRVDKEEEDSSPIANPLSGLANNYADIDEEEEKDA
NIQRKNDGSQHNGHKYQEEDDSDEEEDEQFGGRNSRHVEVRKDCPYLDTVNRQVLDFDFE
KFCSVSLSNLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI
NDPSLDDIRHVLNPRLTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQ
SLMRVTPLRNFFLIPENYQHCKSPLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASK
KRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNMSIIYECFQGELEVVKEIPNRMIIDKKE
DGEDQNNVEKLSDGGTQRNAFLKETSKMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNI
LKKFDGETVTEVVRPHIARMQYRVTRLPKYMIIHMRRFTKNNFFVEKNPTLVNFPVKNLE
LKDYIPLPTPKENEKLRSKYDLIANIVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVSET
LPHLVALSETYMQIYEQQQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaaaaagggaaagggaaactggtaacagaaaagaggaggaagaagggcttcat
tctgacctgagaaggcaaagagtggataaggaggaggaggactcttcccccattgcaaac
cctctttctgggttggccaataattatgctgacattgatgaggaagaggaaaaggatgct
aatattcagaggaagaatgatgggtcccagcataatgggcataaataccaagaggaggat
gatagtgatgaagaagaagatgaacaatttggtggaagaaacagtcgtcatgtcgaggtt
cgaaaggactgtccttatctcgataccgttaatagacaggttttggattttgactttgag
aagttttgttctgtctctctgtcaaacttgaatgtgtacgcatgtttggtttgtggaaag
tatttccaagggagagggaggaagtctcatgcttatacgcatagcctagaagcaggacac
catgtgtatatcaatcttcggactgaaaaagtctactgtcttcccgatggttatgaaatt
aatgatccttcattagatgacatccgacatgtcctaaatccaaggcttactgcaaaagaa
gtcgaacagcttgacaaaaataagcagtggtctagggcacttgatggttctagttaccta
cctggaatggtagggctgaataatatcaaggagactgattttgtgaatgtaacaattcag
tccttaatgagagttacccccttgaggaattttttccttatccctgaaaactatcaacac
tgcaaatctcctcttgttcaacgatttggtgaactcactaggaagatctggcatgcacgg
aactttaaaggacaggtcagcccacacgagtttctacaagcagtgatgaaagccagtaaa
aaaaggtttcggataggtgcgcaatctgacccagtggagttcatgtcatggcttcttaac
actcttcatgcagatcttaaaacttcaaagaagaatatgagcataatttatgagtgtttt
cagggtgaacttgaggttgtaaaagagattcctaacagaatgattattgataagaaagaa
gacggtgaggatcaaaacaacgttgagaaactttctgatggaggaactcagagaaatgcg
ttcctcaaagaaacttcaaaaatgccatttctaatgttagggctggacttgccaccacct
ccgcttttcaaggatgtgatggagaaaaatataataccccaggttccactctttaacata
ctaaagaagtttgacggtgagactgtcacagaagtggtccgtcctcatattgcaaggatg
cagtatcgtgttaccagattgcctaagtatatgattattcacatgcgacgatttacgaag
aataattttttcgtggaaaagaatcctactttagtcaactttcctgtgaagaatctggag
ttgaaggattacattcccttgccaacaccaaaagaaaatgagaaattgcgatctaaatat
gatttaattgccaatattgttcatgatggcaaacctggtgaaggagtctatagagtattt
gtgcaacgcaaatcagaagaattatggtacgagatgcaggatttacacgtctcagaaaca
cttcctcatttggttgcactttcagaaacttatatgcagatatatgagcagcagcagtga
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