Lotus japonicus: 130723417
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Entry
130723417 CDS
T04348
Name
(RefSeq) protein transport protein SEC23 G
KO
K14006
protein transport protein SEC23
Organism
lja
Lotus japonicus
Pathway
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130723417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130723417
Membrane trafficking [BR:
lja04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130723417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-GeneID:
130723417
NCBI-ProteinID:
XP_057430446
LinkDB
All DBs
Position
6:7544217..7547764
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AA seq
754 aa
AA seq
DB search
MDFVELEAVEGLRWSWNSWPAAPSSKSELIIPLSIMCTPLMQGPEMPLLPYDPLSCTGCG
AVLNPYARLDYQSRIWHCPFCSRRNPFPRSIADADTNLPAELFPTYTTVEYSSSCSSLHL
LPNAGAGSVAAPAFVFVIDISTPEDELRFLKNELLLLLHRLPDNALVALVTFDSMVYLHD
LQYSHCSRLVIFHGHRQLFSDQIRKFLNISRPHQLHLGQIPSIPKQGFLVSISECEFSIT
AAIEDIHSTSNFRPGCRPPRCTGAAVSAALGLLECCLINTGSRIMVFTSGPATVGPGLVV
DTDIRQAMRTHHDIFSGRSRHHPKSCSFYQQISKRLSDASVVLDLFACSLDQVGAAELRE
PVEQSGGLVILADSFESDQFRKCLSHLFERNDEGYLKMNFDATIEIVTTKDVKICGALGP
CVSLRKNNSLVSESEVGQGGTCVWKLNTITDRTCIAFFFQVNDEQKVQPGSAFLIQFITR
YRQGNMGPRKRVTTAARRWVASDSTDIAAGFDQEAAASVMARLAILRAETCYARDVIRWL
DDQLIRFSSKFGDYVPEDPSSFRLSSIFSLYPQFMFHLRRSQFIDVSNTTPDETAYFRVM
LNREGVVGSLIMIQPTLFQYSFDGPPVPVLLDIRSICPDSILLFDSFFHVVIHYGSKVTH
WRKVGYDKDPNHENFRKLLEAPELDAEQLVAERVPVPKFIRCDQYSSQARFLLAKLNPSV
TQNSTYTEGSDIIFTDDLSLEIFLDQLQVLAVQG
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtggaattggaggcggttgaaggcctccgttggtcatggaattcatggccg
gcggcgccgtcgtcgaaatcggagctgataatcccactcagcatcatgtgcactccattg
atgcaaggcccggagatgccgcttctcccctacgatcccctcagttgcaccggatgcggc
gccgttttgaacccttacgctcgcctcgactaccagtcacgcatctggcactgccccttc
tgctcgcgccggaaccctttccctcgctccatcgccgacgccgataccaatctccccgcc
gagctcttccctacctacaccaccgtggagtactcttcctcttgctcttcccttcatctt
cttcccaacgctggggctgggagtgttgctgcacccgcttttgtgtttgttatcgatatc
tccactcctgaggatgaactgcgattcctcaagaatgaactcttgcttctcctccaccgt
ttgccagataacgcccttgtcgccttggttaccttcgattccatggtgtatctccacgat
ctccaatattcccactgctcaaggcttgtcatctttcacggtcaccgccaacttttctcc
gatcagatccgaaagtttcttaacattagccgtccccaccagctgcatcttgggcaaata
ccatccatccccaagcagggatttctggtgtcaatttcagaatgtgagttcagtatcact
gctgcaattgaagacatccattctacaagcaacttcaggcctggctgccgcccaccaagg
tgcacaggggctgcagtttcagcagcccttggacttctggagtgttgcctcataaacaca
ggctccaggatcatggtcttcacatctggacctgctactgtaggcccaggactggttgta
gacactgacatccgccaggccatgagaacccaccatgacatcttcagtgggcggtcaaga
caccatccaaaatcttgcagtttctaccagcagatctccaagaggctctctgatgcatct
gttgtccttgatctgtttgcttgctcccttgaccaagtcggagcagctgagcttcgagaa
cctgttgagcagtcgggtggacttgtgattcttgccgactcttttgaatcggatcaattc
aggaaatgtcttagtcacctgtttgaacgcaatgacgagggttatttgaagatgaacttt
gatgcgaccattgaaatagtgaccactaaagatgtgaaaatttgtggagctcttggtcct
tgtgtgtctcttagaaaaaacaacagtttggtaagtgagtccgaggttggacaaggtggt
acctgcgtgtggaagttgaatacaatcactgacagaacttgcattgcctttttcttccaa
gtgaatgatgagcagaaagttcaacccggctctgcctttctgattcagtttatcacacgg
tacaggcaggggaacatggggcctcgaaaacgagtcaccactgctgctagacgatgggtt
gcaagtgattccactgatattgctgctggctttgatcaagaagccgcagcttcagttatg
gcaagacttgctattctcagggcagagacatgctatgctcgagatgtcattagatggctt
gatgaccaactaattcgtttttcatccaagtttggggactatgtgccagaagatccttct
tccttccgcttatcttccatcttttccctttatcctcagtttatgttccacttgaggcga
tctcaatttattgacgtgtctaacactactcctgatgaaactgcatatttccgggttatg
ctgaaccgtgagggtgtagttggttctcttataatgattcaacctacactgttccaatat
tcttttgatgggccacctgttccagtactccttgacattcgttctatttgtccggattcc
atcttgctctttgattctttcttccatgttgtgattcattatgggtccaaggtcactcac
tggaggaaggtcggttatgataaggacccaaatcatgagaactttagaaagctgctggaa
gccccagaactggatgcagagcaattggtggctgaacgggttccagtgccgaaatttata
agatgtgaccagtatagtagtcaagctaggtttcttcttgccaaattgaatccatctgtt
actcaaaattcaacttacacagaaggttcggatattatcttcaccgatgatttgagctta
gaaatttttctagatcaattgcaggtactggcagtgcaaggctga
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