KEGG   Lotus japonicus: 130723459
Entry
130723459         CDS       T04348                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein RHN1-like
  KO
K07887  Ras-related protein Rab-5A
Organism
lja  Lotus japonicus
Pathway
lja04144  Endocytosis
lja04145  Phagosome
lja04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130723459
   04145 Phagosome
    130723459
   04148 Efferocytosis
    130723459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lja04131]
    130723459
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    130723459
   04031 GTP-binding proteins [BR:lja04031]
    130723459
Membrane trafficking [BR:lja04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    130723459
 Endosome - Lysosome transport
    130723459
Exosome [BR:lja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130723459
  Exosomal proteins of other body fluids (saliva and urine)
   130723459
  Exosomal proteins of colorectal cancer cells
   130723459
  Exosomal proteins of bladder cancer cells
   130723459
GTP-binding proteins [BR:lja04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    130723459
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 TsaE AAA_24
Other DBs
NCBI-GeneID: 130723459
NCBI-ProteinID: XP_057430514
LinkDB
Position
6:9115263..9119998
AA seq 209 aa
MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAF
AGNKSDLEDKRKVTADEARVYAEENGLFFMETSAKTAANVNDVFYEIAKRLPRAQPAQNP
AGMVLVDRPAEELGLHHVVHKVFELYLLP
NT seq 630 nt   +upstreamnt  +downstreamnt
atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt
gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa
tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgcaactgttaaa
tttgagatttgggacacagcggggcaagagaggtaccatagcttggctcccatgtattac
agaggcgctgctgctgctatcattgtctacgacatcactagctcagattcgtttacacga
gctaagaagtgggtccaagagcttcaaaagcaagggaaccctaacatggtcatggctttc
gctggtaacaaatctgacttggaagataagagaaaagtgactgctgatgaggcacgtgtt
tatgctgaagaaaatggtctgtttttcatggagacctctgccaaaactgcagccaatgtt
aatgatgtattttatgaaatagccaagaggttaccaagggctcagccagctcaaaaccca
gcagggatggttcttgttgatagacccgccgaagagctagggcttcatcatgttgttcat
aaagtatttgagctgtatttactcccctga

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