Lotus japonicus: 130723536
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Entry
130723536 CDS
T04348
Name
(RefSeq) lysine--tRNA ligase-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lja
Lotus japonicus
Pathway
lja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130723536
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lja01007
]
130723536
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130723536
Enzymes [BR:
lja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
130723536
Amino acid related enzymes [BR:
lja01007
]
Aminoacyl-tRNA synthetase
Class II (A)
130723536
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130723536
Prokaryotic type
Other AARSs
130723536
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TRM10_TRM10A
DUF7661
Motif
Other DBs
NCBI-GeneID:
130723536
NCBI-ProteinID:
XP_057430595
LinkDB
All DBs
Position
6:complement(55231500..55238237)
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AA seq
655 aa
AA seq
DB search
MMKAFLFTLINQLPVTTTLQKTGWSRNPIYNAVRRRPFLKTLVAHLTVPSDPATLSAAPM
EVPSEPPPATATGETISKNALKRELKNKQKEEERKRKEEEKAKKAAEMQSAKDNKSAPVD
EDDMDPTQYFENRIKYLAGQKGEGNNPYPHKFFVTMSVAEYIKEYEGLSNGQHLEDVSVS
LAGRIMHKRASGAKLVFYDLHGGGFKVQVMADASKSDLNEAEFSKFHSNVKRGDIVGITG
FPGKSKKGELSIFPKTFVVLSHCLHMMPRQKSAAAADNANLKKNLWVPGNTRNPETYILK
DQETRYRLRHLDLMLNPEVREIFKTRSKIISYIRRFLDDLDFLEVETPMMNMIAGGAAAR
PFVTHHNDLNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFY
MAYMDYNDLMELTEQLLSGMVKELTKGSYKIKYHADGIDKDPIEIDFTPPFRRIDMIEDL
EKMAGLNIPKDLSSEEANQYLRDACLKHEIKCPPPETTARLLDKLVGHFLEETCVNPTFI
INHPEIMSPLAKWHRSKPGQTERFELFVNKHEVCNAYTELNDPVVQRQRFAEQLKDRQSG
DDEAMALDETFCTALEYGLPPTAGWGLGIDRLTMIFTDSQNIKEVLLFPAMKPQD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagcatttctctttacacttattaatcagttaccagttactactactctacaa
aaaacgggttggagccgaaatccaatatataacgcagttaggcgccgcccgtttttgaaa
accctagttgcgcacctgactgtgccctctgatccggcaactctctccgccgcaccgatg
gaagttccttccgagccaccgccagcaaccgccaccggcgaaaccattagcaagaatgca
ctgaagcgggaactcaagaacaagcagaaggaagaagaacggaaacgcaaggaggaggaa
aaagccaaaaaggctgctgaaatgcaaagtgctaaggataacaaatctgcacctgttgat
gaagatgatatggacccaacgcaatactttgagaataggataaagtatcttgcaggtcag
aaaggagaagggaataacccgtatccgcacaagttctttgtcactatgtctgttgctgaa
tacattaaggagtatgaaggtttaagcaatgggcaacaccttgaggacgtctctgtgtct
ttggctggccgaatcatgcacaagcgcgcatctggtgcaaagcttgtcttttatgatctg
cacggtggtggtttcaaggttcaggttatggccgatgcaagtaaatcggacttgaatgaa
gctgagttttccaagttccattctaatgtgaagcgtggtgacattgttggcatcactggg
tttccaggcaaaagcaagaagggagagcttagtatattccctaagacttttgtggtactg
tctcactgtctgcatatgatgccgaggcaaaaatccgcagctgctgctgataatgcaaat
ttgaagaaaaatctgtgggtaccaggaaataccaggaatcctgaaacctacattttgaaa
gatcaggaaacaagataccgattacgccatttggatttgatgcttaatccagaggttcga
gaaatattcaagactaggtccaaaatcatttcttacattaggaggttccttgatgacctt
gatttcttggaggttgaaacacctatgatgaacatgattgctggtggagctgcagcccgt
ccatttgtaacacatcacaatgatcttaatatgaggttattcatgagaattgctccagaa
ctctatcttaaggagttggttgttggtgggctggaccgtgtttatgaaattggtaaacaa
tttaggaatgagggcattgatttgactcataatcctgagtttactacctgtgagttctat
atggcatatatggactacaacgacttaatggaactaactgagcaattgttgagtggtatg
gttaaggagcttacaaaaggcagctataaaatcaagtatcatgcagatgggattgataag
gatcctattgaaatcgattttactccacctttcagaaggattgacatgattgaagattta
gagaagatggcaggcctcaatattcccaaagacttgtcaagtgaggaagctaaccaatat
ctgagggatgcttgcttgaagcatgagatcaaatgccctcctcccgaaacaactgctcgt
ttgttggataaacttgtggggcactttttggaagaaacgtgtgtgaatcctacattcatc
ataaaccatcctgagataatgagtccattggcaaagtggcacagatcaaaaccaggccag
actgaacgttttgaattgtttgttaataaacatgaagtttgcaatgcatatacggaattg
aacgaccctgtggtgcaacgacagagatttgctgaacaactaaaggaccggcaatcaggt
gatgatgaggcaatggccttagatgaaacattttgtactgctttggagtatggtttgcca
ccaacagctggttggggtttgggtattgataggttgaccatgatattcactgattcacag
aatattaaggaggttctacttttccctgccatgaagcctcaagattga
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