Lotus japonicus: 130723676
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Entry
130723676 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130723676 isoform X1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
lja
Lotus japonicus
Pathway
lja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130723676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130723676
Enzymes [BR:
lja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
130723676
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
90S particles
Other 90S particles
130723676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
130723676
NCBI-ProteinID:
XP_057430768
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All DBs
Position
6:complement(55970591..55974343)
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AA seq
314 aa
AA seq
DB search
MWLRVYNCVFVVSRGCLPSAAVTAVSVVFFSSSSSELWLREAMTRPFGMKGRKRKDKEAK
YDREEDEDEQVQPKRPMLQNAEVAAANEEDELVGIPIMPSDHKSDNPNVIFILERASLEV
AKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQALLSILDSPLNKAGRLQAVYIKTE
KGVLIEVKPYVRIPRTFKRFSGVMLQLLQKLSISAAGKHEKLLRTIKNPVTQYLPVNSRK
IGLSFSSEKLVNMNDYVSTVPSDMNLVFVVGAMAHGKVETDYTEDYIAVSGYPLSAAYCI
TRICNALEAKWKIL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgagggtttataattgtgtttttgtggtttccagaggttgtcttccatccgcc
gccgtaaccgcagtctccgtcgttttcttctcttcctcttcgtcggagttgtggttgagg
gaagccatgacacgaccttttggtatgaaggggcggaagagaaaggacaaggaagctaaa
tatgatcgcgaagaagatgaagacgaacaagtgcaacctaagagacctatgctccaaaat
gctgaagtagctgcagcaaatgaggaggatgaacttgtaggtatcccaattatgcctagt
gaccacaagagtgacaaccctaatgtcatattcattcttgaaagggcttctttggaagtc
gccaaggttggcaagacttatcagcttttgaactcggatgaccatgccaatttcctccgc
aaaaataacaagaatcctggtgattataggcctgacattactcatcaggcccttctatct
attttagatagcccactaaataaagctgggaggttgcaggcagtatacataaagactgaa
aaaggtgttcttatagaggttaagccctatgttcgtattccaagaacattcaaacggttc
tctggtgtcatgttacaactgcttcaaaaattgagcatatctgctgctggcaagcatgag
aaacttctccgcacaataaaaaaccctgtgactcagtatctgcctgtcaactcacgaaaa
ataggtctttcattcagttcagaaaagctcgtaaatatgaatgactacgtatcaactgtt
ccaagcgatatgaaccttgtctttgtggtaggagcaatggcccatgggaaggttgagacg
gattacacagaggactatatagcagtttctgggtaccctctaagtgctgcttactgtatt
acaaggatttgcaacgcccttgaggcaaagtggaagatattgtga
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