Lotus japonicus: 130723709
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Entry
130723709 CDS
T04348
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
lja
Lotus japonicus
Pathway
lja04142
Lysosome
lja04144
Endocytosis
lja05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130723709
04142 Lysosome
130723709
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130723709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130723709
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
130723709
Membrane trafficking [BR:
lja04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130723709
Exosome [BR:
lja04147
]
Exosomal proteins
Proteins found in most exosomes
130723709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
130723709
NCBI-ProteinID:
XP_057430817
UniProt:
X4Z1M5
LinkDB
All DBs
Position
6:14569387..14581572
Genome browser
AA seq
1702 aa
AA seq
DB search
MAAAANAPITMREALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIVDMSMPM
QPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKW
ITPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPG
SPERPQLVKGNMQLFSVDQQRSQALEAHAASFAQLKVPGNENPSTLISFATKTLNAGQII
SKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYNLIYVITKLGLLFVYD
LETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLE
LAVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPV
QAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDL
VKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDP
QGAVNFALMMSQMEGGCPLDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHA
IEPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQF
RSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESTFYDPEKTKNFLME
AKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNSPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLSQFLEHLVSEGSQDAHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQAR
YVVERMDGDLWEKVLNPDNAYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADTSRVMDYINRLDNFDGPAVGEMAVEAQLY
EEAFAIFKKFNLNVQAVNVLLDNIHSIDRAEEFAFRVEEDAVWSQVAKAQLREGLVSEAI
ESFIRADDATQFLDVIRAAQNTNAYNDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSD
IEEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAAR
KANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEFYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLY
IQYDEFDNAATTIMNHSPEAWDHMQFKDVIVKVANVELYYKSVHFYLQEHPDLLNDVLNV
LALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESID
LHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSG
ERELAEELLVYFIDQGKKECFASCLFVCYDLIRADVALELAWIHNIIDFAFPYVLQLLRE
YTGKVDELVKDKIEAQKEVKAKEQEEKEVIQQQNMYAQLLPLALPAPPMPGMGGGYAPPP
PMGGMGMPPMPPFGMPPMGSSY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgccaacgctccgatcaccatgcgtgaagccctcaccttgccgagcatt
ggtataaatccgcagttcatcacgttcactcacgtgacgatggagtctgataagtacata
tgcgttcgagaaacttctccgcagaatagcgtggtgatcgttgatatgagcatgccgatg
caacctttgaggaggcctattactgctgattctgctcttatgaatccgaattcgagaatc
cttgctctgaaagcccaactccaaggaacaactcaagatcacctacaaatatttaatatt
gaaatgaaggcaaagatgaaatcttaccagatgcctgagcaggtagtcttttggaagtgg
attactcccaagttgttgggtcttgtgacacagacatctgtataccattggtcaattgag
ggtgactctgaacctgtaaagatgttcgagagaacagcgaatttggcaaacaatcaaata
attaattatcgatgtgatcctacagaaaagtggttggtcttgattggtattgctcctggt
tcccctgagaggccacagttggttaaaggaaacatgcaactcttctccgtggatcaacag
cgcagccaagctcttgaagcacacgctgcatcatttgctcagttaaaagttcctgggaat
gaaaatccttctactttgatttcgtttgccacgaagacacttaatgctggacaaattata
tccaagttgcatgttattgagctgggtgcacaaccagggaagccatcatttacaaagaaa
caagcagatcttttctttcccccagattttgctgatgacttcccagttgccatgcagata
tcccacaaatacaatttgatttatgtgatcacgaaacttggtctcctatttgtctatgat
ttggagacggccactgctgtgtataggaacagaattagtccagatcctatatttttgacg
tcagaagctacatcagttggaggcttttatgccattaacaggagaggccaggtgttattg
gctactgttaatgagcaaacaattgtgaattttgtcagtggtcaattaaataatttggag
ctagccgtcaatcttgccaagagaggaaaccttccaggtgctgagaagctggttgttgaa
cgtttccatgaactgtttgcccaaacaaagtataaagaagcagctgagcttgctgctgag
tccccgcaaggaatccttcgtacacctgatacagttgccaaatttcagagtgttcctgtg
caagctggacaaactcctccactcttgcagtattttggaacccttttaactagaggaaag
ctgaatgcctttgaatcattagaattgtcacggctggttgtgaatcagaacaagaaaaat
cttttggaaaattggttggcagaggacaagcttgaatgcagtgaggaactaggagatctt
gtaaagactgtggacaatgaccttgccttaaaaatatatatcaaagccagagctactcca
aaagttgttgctgcgtttgctgagcgaagggagtttgacaagattctcatatattctaag
caggttgggtacacacctgactatctcttccttttgcaaacaattctccggacagatcct
cagggtgctgttaattttgcattaatgatgtctcaaatggagggaggttgtcctcttgat
tacaacaccataactgatctgtttcttcagagaaacttgatccgtgaggctactgccttt
ctcctagatgttttgaagccaaatttacctgaacatggtttccttcaaacaaaggttttg
gagataaatctggtaacgtttcccaatgttgctgatgctattttggctaatggcatgttc
agccattatgatcgtccacgtattgcccaactttgtgaaaaagctggtctttatgtgcga
gctttgcaacattacacagagttgccagatataaaacgtgtgatagttaatacacatgca
attgagccacagtcacttgttgagttttttggtactctgtcacgagaatgggccttagag
tgcatgaaagatctgttactggtcaatcttagaggcaacctacagataattgttcaggtt
gctaaagaatattgtgaacagttgggcgttgatgcttgcattaagatttttgagcaattc
aggtcctatgaaggactctatttcttccttggttcatatttaagctccagtgaggatccc
gacatccacttcaagtacattgaggcagcagcaaagactggacaaatcaaagaggtcgag
cgtgtgactagagaatcaactttctatgatcctgagaaaacgaagaactttctaatggaa
gctaagcttcccgatgcacgacctcttattaatgtttgcgatcgatttggatttgttcct
gatctgacacactatctatacacaaataacatgcttcgctacattgaaggatatgttcag
aaggtgaacccagggaattctcctctagttgttgggcagctgctagatgatgagtgtcca
gaagattttatcaaaggcttgattctctctgttcgttcattgctgccggtggagccactg
gtggaggaatgtgagaagaggaatcggcttcgtttgctttcacagtttctggaacatctt
gtaagtgagggaagccaggatgcacatgttcataatgctctgggtaagatcatcattgat
agcaacaacaacccagaacattttctcactacaaacccatactatgattctcgagttgtg
ggaaaatattgtgaaaaacgtgatcctaccttggccgttgtggcttataggcgaggacaa
tgtgatgatgaacttatcaatgtgacaaacaaaaattctttgttcaaactacaagcaagg
tatgttgttgagaggatggatggtgacctttgggagaaagttcttaaccctgataatgcc
tacagaagacagcttattgatcaagttgtatctactgctctgcctgaaagcaagagccct
gaacaagtctctgcagctgttaaggctttcatgactgctgatctacctcatgaattgatt
gagcttcttgagaagattgtgcttcagaattctgctttcagtgggaactttaatttgcag
aatctgcttatcttgacagcaataaaggctgatacatccagagtcatggattatataaat
agactggataattttgatggtcctgcagttggagaaatggctgttgaggctcagttatat
gaagaagcatttgcaatttttaagaagttcaacttaaatgttcaagcagtcaatgtcttg
ctagataatattcatagcattgatagagctgaggagtttgctttccgagttgaagaggat
gctgtatggagtcaggtggccaaggctcaactcagggaagggctagtaagtgaagcaatt
gagtcatttatacgagcagatgatgccacacaatttttggatgttatccgtgctgctcaa
aataccaatgcttacaatgacttggtgagatacttgctgatggtaaggcaaaagacaaaa
gaacccaaggtggacagtgagctcatttatgcttatgcaaagatcgacaggctcagtgac
attgaggagttcattcttatgccgaatgtggccaatcttcaaaatgttggtgaccgattg
tatgatgaagagctatatgaggctgcaaaaattatatttgcttttatatctaactgggcc
aagttagcagtcacacttgtgaagttgaaacagttccaaggtgctgttgatgcagcaagg
aaagctaacagctcaaaaacatggaaggaagtttgcttcgcgtgtgttgatgcagaggag
ttccgtttggcccagatatgtgggttgaacattattgttcaggtggatgacttggaagag
gtcagtgaattttaccaaaatagaggttgcttcaacgagctaatatccctcatggagagt
ggtttaggattagaacgggcacatatgggcatctttaccgagttaggagttctgtacgct
agataccgtcctgagaaacttatggaacatatcaaactatttgcaacccgactcaatatt
ccaaaactcataagagcttgtgatgaacaacaacattggaaggaactgacctatttgtat
atccaatatgatgagtttgacaatgcagcaacaaccatcatgaaccattcacctgaagca
tgggatcacatgcaattcaaagatgttattgtcaaagttgctaatgtggagttgtattac
aagtctgttcatttctatttgcaagagcatccagatcttctaaacgatgttttgaatgtc
cttgcacttcgtgttgaccatgcacgcgttgttgatatcatgcgaaaggctggtcatctc
cgtcttgtcaagccatacatggttgcagttcagagcaataacgtgtctgctgttaatgaa
gccctgaatgagatatatgtggaggaggaagactatgatagattgcgcgagtcaattgat
ttgcacgacaactttgaccaaataggcctggcacagaagattgaaaagcatgagcttctt
gagatgagacgtgttgctgcttatatttataagaaggctggtaggtggaagcagtccatt
gccttgtcaaagaaggataacctttacaaagatgccatggagacggcctcacaatctggt
gaacgtgaacttgctgaggagttacttgtttatttcattgatcagggaaaaaaggaatgc
tttgcctcgtgtctatttgtttgctatgatttaatcagggcagacgttgctcttgaactg
gcttggatccacaatataattgactttgccttcccatacgtgttacagcttctccgcgag
tacactggcaaagttgatgaactggtgaaggacaaaattgaagcacagaaagaagtgaag
gctaaagaacaagaagagaaggaagtaattcaacaacagaatatgtatgctcaattgttg
cctcttgctttgcctgcaccaccaatgcccggaatgggaggaggctatgcccctccccct
ccaatgggtgggatggggatgcctccaatgcctccttttggcatgccacccatgggcagc
agctactga
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integrated database retrieval system