KEGG   Lotus japonicus: 130723709
Entry
130723709         CDS       T04348                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
lja  Lotus japonicus
Pathway
lja04142  Lysosome
lja04144  Endocytosis
lja05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:lja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130723709
   04142 Lysosome
    130723709
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    130723709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lja04131]
    130723709
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    130723709
Membrane trafficking [BR:lja04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    130723709
Exosome [BR:lja04147]
 Exosomal proteins
  Proteins found in most exosomes
   130723709
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 130723709
NCBI-ProteinID: XP_057430817
UniProt: X4Z1M5
LinkDB
Position
6:14569387..14581572
AA seq 1702 aa
MAAAANAPITMREALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIVDMSMPM
QPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKW
ITPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPG
SPERPQLVKGNMQLFSVDQQRSQALEAHAASFAQLKVPGNENPSTLISFATKTLNAGQII
SKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYNLIYVITKLGLLFVYD
LETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLE
LAVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPV
QAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDL
VKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDP
QGAVNFALMMSQMEGGCPLDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVL
EINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHA
IEPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQF
RSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESTFYDPEKTKNFLME
AKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNSPLVVGQLLDDECP
EDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLSQFLEHLVSEGSQDAHVHNALGKIIID
SNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQAR
YVVERMDGDLWEKVLNPDNAYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELI
ELLEKIVLQNSAFSGNFNLQNLLILTAIKADTSRVMDYINRLDNFDGPAVGEMAVEAQLY
EEAFAIFKKFNLNVQAVNVLLDNIHSIDRAEEFAFRVEEDAVWSQVAKAQLREGLVSEAI
ESFIRADDATQFLDVIRAAQNTNAYNDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSD
IEEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAAR
KANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEFYQNRGCFNELISLMES
GLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLY
IQYDEFDNAATTIMNHSPEAWDHMQFKDVIVKVANVELYYKSVHFYLQEHPDLLNDVLNV
LALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESID
LHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSG
ERELAEELLVYFIDQGKKECFASCLFVCYDLIRADVALELAWIHNIIDFAFPYVLQLLRE
YTGKVDELVKDKIEAQKEVKAKEQEEKEVIQQQNMYAQLLPLALPAPPMPGMGGGYAPPP
PMGGMGMPPMPPFGMPPMGSSY
NT seq 5109 nt   +upstreamnt  +downstreamnt
atggcggccgccgccaacgctccgatcaccatgcgtgaagccctcaccttgccgagcatt
ggtataaatccgcagttcatcacgttcactcacgtgacgatggagtctgataagtacata
tgcgttcgagaaacttctccgcagaatagcgtggtgatcgttgatatgagcatgccgatg
caacctttgaggaggcctattactgctgattctgctcttatgaatccgaattcgagaatc
cttgctctgaaagcccaactccaaggaacaactcaagatcacctacaaatatttaatatt
gaaatgaaggcaaagatgaaatcttaccagatgcctgagcaggtagtcttttggaagtgg
attactcccaagttgttgggtcttgtgacacagacatctgtataccattggtcaattgag
ggtgactctgaacctgtaaagatgttcgagagaacagcgaatttggcaaacaatcaaata
attaattatcgatgtgatcctacagaaaagtggttggtcttgattggtattgctcctggt
tcccctgagaggccacagttggttaaaggaaacatgcaactcttctccgtggatcaacag
cgcagccaagctcttgaagcacacgctgcatcatttgctcagttaaaagttcctgggaat
gaaaatccttctactttgatttcgtttgccacgaagacacttaatgctggacaaattata
tccaagttgcatgttattgagctgggtgcacaaccagggaagccatcatttacaaagaaa
caagcagatcttttctttcccccagattttgctgatgacttcccagttgccatgcagata
tcccacaaatacaatttgatttatgtgatcacgaaacttggtctcctatttgtctatgat
ttggagacggccactgctgtgtataggaacagaattagtccagatcctatatttttgacg
tcagaagctacatcagttggaggcttttatgccattaacaggagaggccaggtgttattg
gctactgttaatgagcaaacaattgtgaattttgtcagtggtcaattaaataatttggag
ctagccgtcaatcttgccaagagaggaaaccttccaggtgctgagaagctggttgttgaa
cgtttccatgaactgtttgcccaaacaaagtataaagaagcagctgagcttgctgctgag
tccccgcaaggaatccttcgtacacctgatacagttgccaaatttcagagtgttcctgtg
caagctggacaaactcctccactcttgcagtattttggaacccttttaactagaggaaag
ctgaatgcctttgaatcattagaattgtcacggctggttgtgaatcagaacaagaaaaat
cttttggaaaattggttggcagaggacaagcttgaatgcagtgaggaactaggagatctt
gtaaagactgtggacaatgaccttgccttaaaaatatatatcaaagccagagctactcca
aaagttgttgctgcgtttgctgagcgaagggagtttgacaagattctcatatattctaag
caggttgggtacacacctgactatctcttccttttgcaaacaattctccggacagatcct
cagggtgctgttaattttgcattaatgatgtctcaaatggagggaggttgtcctcttgat
tacaacaccataactgatctgtttcttcagagaaacttgatccgtgaggctactgccttt
ctcctagatgttttgaagccaaatttacctgaacatggtttccttcaaacaaaggttttg
gagataaatctggtaacgtttcccaatgttgctgatgctattttggctaatggcatgttc
agccattatgatcgtccacgtattgcccaactttgtgaaaaagctggtctttatgtgcga
gctttgcaacattacacagagttgccagatataaaacgtgtgatagttaatacacatgca
attgagccacagtcacttgttgagttttttggtactctgtcacgagaatgggccttagag
tgcatgaaagatctgttactggtcaatcttagaggcaacctacagataattgttcaggtt
gctaaagaatattgtgaacagttgggcgttgatgcttgcattaagatttttgagcaattc
aggtcctatgaaggactctatttcttccttggttcatatttaagctccagtgaggatccc
gacatccacttcaagtacattgaggcagcagcaaagactggacaaatcaaagaggtcgag
cgtgtgactagagaatcaactttctatgatcctgagaaaacgaagaactttctaatggaa
gctaagcttcccgatgcacgacctcttattaatgtttgcgatcgatttggatttgttcct
gatctgacacactatctatacacaaataacatgcttcgctacattgaaggatatgttcag
aaggtgaacccagggaattctcctctagttgttgggcagctgctagatgatgagtgtcca
gaagattttatcaaaggcttgattctctctgttcgttcattgctgccggtggagccactg
gtggaggaatgtgagaagaggaatcggcttcgtttgctttcacagtttctggaacatctt
gtaagtgagggaagccaggatgcacatgttcataatgctctgggtaagatcatcattgat
agcaacaacaacccagaacattttctcactacaaacccatactatgattctcgagttgtg
ggaaaatattgtgaaaaacgtgatcctaccttggccgttgtggcttataggcgaggacaa
tgtgatgatgaacttatcaatgtgacaaacaaaaattctttgttcaaactacaagcaagg
tatgttgttgagaggatggatggtgacctttgggagaaagttcttaaccctgataatgcc
tacagaagacagcttattgatcaagttgtatctactgctctgcctgaaagcaagagccct
gaacaagtctctgcagctgttaaggctttcatgactgctgatctacctcatgaattgatt
gagcttcttgagaagattgtgcttcagaattctgctttcagtgggaactttaatttgcag
aatctgcttatcttgacagcaataaaggctgatacatccagagtcatggattatataaat
agactggataattttgatggtcctgcagttggagaaatggctgttgaggctcagttatat
gaagaagcatttgcaatttttaagaagttcaacttaaatgttcaagcagtcaatgtcttg
ctagataatattcatagcattgatagagctgaggagtttgctttccgagttgaagaggat
gctgtatggagtcaggtggccaaggctcaactcagggaagggctagtaagtgaagcaatt
gagtcatttatacgagcagatgatgccacacaatttttggatgttatccgtgctgctcaa
aataccaatgcttacaatgacttggtgagatacttgctgatggtaaggcaaaagacaaaa
gaacccaaggtggacagtgagctcatttatgcttatgcaaagatcgacaggctcagtgac
attgaggagttcattcttatgccgaatgtggccaatcttcaaaatgttggtgaccgattg
tatgatgaagagctatatgaggctgcaaaaattatatttgcttttatatctaactgggcc
aagttagcagtcacacttgtgaagttgaaacagttccaaggtgctgttgatgcagcaagg
aaagctaacagctcaaaaacatggaaggaagtttgcttcgcgtgtgttgatgcagaggag
ttccgtttggcccagatatgtgggttgaacattattgttcaggtggatgacttggaagag
gtcagtgaattttaccaaaatagaggttgcttcaacgagctaatatccctcatggagagt
ggtttaggattagaacgggcacatatgggcatctttaccgagttaggagttctgtacgct
agataccgtcctgagaaacttatggaacatatcaaactatttgcaacccgactcaatatt
ccaaaactcataagagcttgtgatgaacaacaacattggaaggaactgacctatttgtat
atccaatatgatgagtttgacaatgcagcaacaaccatcatgaaccattcacctgaagca
tgggatcacatgcaattcaaagatgttattgtcaaagttgctaatgtggagttgtattac
aagtctgttcatttctatttgcaagagcatccagatcttctaaacgatgttttgaatgtc
cttgcacttcgtgttgaccatgcacgcgttgttgatatcatgcgaaaggctggtcatctc
cgtcttgtcaagccatacatggttgcagttcagagcaataacgtgtctgctgttaatgaa
gccctgaatgagatatatgtggaggaggaagactatgatagattgcgcgagtcaattgat
ttgcacgacaactttgaccaaataggcctggcacagaagattgaaaagcatgagcttctt
gagatgagacgtgttgctgcttatatttataagaaggctggtaggtggaagcagtccatt
gccttgtcaaagaaggataacctttacaaagatgccatggagacggcctcacaatctggt
gaacgtgaacttgctgaggagttacttgtttatttcattgatcagggaaaaaaggaatgc
tttgcctcgtgtctatttgtttgctatgatttaatcagggcagacgttgctcttgaactg
gcttggatccacaatataattgactttgccttcccatacgtgttacagcttctccgcgag
tacactggcaaagttgatgaactggtgaaggacaaaattgaagcacagaaagaagtgaag
gctaaagaacaagaagagaaggaagtaattcaacaacagaatatgtatgctcaattgttg
cctcttgctttgcctgcaccaccaatgcccggaatgggaggaggctatgcccctccccct
ccaatgggtgggatggggatgcctccaatgcctccttttggcatgccacccatgggcagc
agctactga

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