Lotus japonicus: 130723725
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Entry
130723725 CDS
T04348
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130723725
Enzymes [BR:
lja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
130723725
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130723725
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
130723725
NCBI-ProteinID:
XP_057430832
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All DBs
Position
6:40876918..40883431
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AA seq
618 aa
AA seq
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MAPAAIKKKATKQQRKSPMKPKKPKHFTPKEDSPAESEEEAPQLLELGSDDGGGDDSASD
FSDGDDPLVDDFLQGSDDNEGKASASASGSESDSDSDSDIEGRSGRIDKERKRVEEDAIA
ELQLNIKDESDEFRLPTKQELEEETQRPPDLPNLQRRIKEIVRVLSNFKALRQEDATRKD
YIEQLKTDICSYYGYNEFLIGALVEIFPVVELMELIEAFEKPRPTCLRTNTLKTRRRDLA
DVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALNPQEK
ERVVDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTANLHRMGVSNTVVCNYDGK
ELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKHLEDIQKCAQLQKELILAAIDMVD
ANSKSGGYLVYSTCSIMVAENEAVIDYALKRRDVKLVACGLDFGRPGFTKFRGQRFHPSL
DKTRRFYPHVHNMDGFFVAKLKKLSNSKQGAKPSETSENVEIDTEVVEEEDKPSNGVKEN
GKQTSESELKTKEKRKFPSKPSNGIKANGKVSSEPESKRRKKRLFPSKEEISNAREQKRS
ALRENKEKGGKQQRSKRQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgccgcaatcaagaagaaagctacaaaacagcaacgcaaatctccgatgaag
cccaaaaaacccaagcacttcactcccaaggaagattctcccgccgaatccgaagaagaa
gctccacagctactcgaactcggaagcgacgacggcggcggcgacgactccgcttctgat
ttctccgacggggatgatcctttggttgacgatttcctccaaggaagtgatgataatgaa
gggaaagcctcggcctcggcttcgggttcggaatctgattctgattctgattcggatatt
gaggggaggtcgggaaggattgataaagaaaggaagagagtagaagaggatgcgatagct
gaattgcagctcaatatcaaagatgagtctgacgagttcagattaccaaccaagcaggaa
cttgaggaggagactcaacgcccacctgatcttcccaaccttcagaggagaattaaagag
attgttcgcgttctttcaaattttaaggccttgaggcaagaggatgcgacaaggaaggat
tacattgagcagctcaagactgatatatgttcgtactatggctacaatgagtttctaatt
ggcgctctagttgagatatttccagttgttgaacttatggagctgattgaagcctttgaa
aagcctcgccctacatgtctgaggactaacactttaaagacacgtagacgggatttagca
gatgttttgataaacagaggagtaaatctggatcctctaagcaaatggtcaaaagttgga
cttgttgtgtatgattctcaagtaccaattggtgccactccagagtatatggctggtttc
tacatgcttcaaagtgcaagttcatttcttcctgtgatggccttgaatcctcaagagaag
gaacgtgttgttgatatggcggctgcgcctggtggtaaaacaacatatattgccgctctg
atgaagaacactggtataatttttgcaaatgagatgaaggtaccacggctcaagtcactg
actgcaaatttgcatcgtatgggtgtatcaaacactgtagtatgtaactatgatggaaag
gagcttccgaaggttttgggtctcaataccgttgatagggtattattggatgctccttgc
agtggaactggggttatatccaaagatgagtccgttaaaacctctaaacatttggaagat
atacagaaatgtgcccaactacagaaggagctcattcttgctgcaattgacatggtggat
gctaattcaaaatctggggggtaccttgtatattccacatgctcaattatggttgctgag
aatgaagcagttattgattatgcccttaaaaggagggatgttaagctggttgcttgtgga
cttgactttggacgtccagggtttacaaagtttagggggcaacgctttcatccgtcctta
gataagacgagacgtttctatcctcatgtacacaatatggatggtttttttgttgcgaag
ttgaaaaaattgagcaactcaaagcaaggtgcaaaaccatcagaaacatctgaaaatgtc
gaaatagatacagaggttgtggaggaagaggacaaaccaagtaatggcgtaaaagaaaat
ggcaaacaaacttctgaatctgaattgaaaacgaaggaaaaaaggaaattcccatcaaaa
ccaagtaatggtattaaagcaaatggcaaagtgtcttccgaaccagaatccaaaagaagg
aagaaaaggctatttccatctaaagaggagatttcaaatgccagggagcagaagaggagt
gctttaagagaaaacaaggaaaagggtggtaagcaacagaggtcaaaaaggcagtga
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