KEGG   Lotus japonicus: 130723812
Entry
130723812         CDS       T04348                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
lja  Lotus japonicus
Pathway
lja04144  Endocytosis
lja04517  IgSF CAM signaling
lja04519  Cadherin signaling
lja05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:lja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    130723812
   04519 Cadherin signaling
    130723812
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130723812
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    130723812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lja04131]
    130723812
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lja04812]
    130723812
Membrane trafficking [BR:lja04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    130723812
Cytoskeleton proteins [BR:lja04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     130723812
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR3_2nd Beta-prop_Aladin Tricorn_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd RMC1_N eIF2A Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Ge1_WD40 BNR_3 NBCH_WD40
Other DBs
NCBI-GeneID: 130723812
NCBI-ProteinID: XP_057430931
LinkDB
Position
6:complement(45800917..45810668)
AA seq 376 aa
MAVMAVHQFAQCITCHAWSPDQSMVALCPNNNEVHIYRLVEDKWEKVHVLQKHDQVVSGI
DWSTRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVSWHPNNILLATTSTDGKCRVFSTFIKGVDA
KDSIKGTLSDSKFGELIVQLDLSSSWTFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA
QNVVFRDLPLRDVLFVSERTVIGVGFDCNPMVFAADERGIWSFIRYLGERKTASSPSRYG
SQFSEAFGKFYGQSKHGVSNDTVDTSRTRGAVHENCINSIIPLGEHGALTRRFSTSGLDG
RIVLWDLENEQDILEL
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcggtgatggcggttcatcagttcgcacaatgcatcacttgccacgcatggagcccc
gatcaatccatggtcgcattatgtccaaacaataatgaagtgcacatatatagattagtg
gaagacaaatgggaaaaggtgcatgttcttcaaaagcatgaccaggtagtttctgggata
gattggagtacgagatcaaatagaatagtcactgcatcacatgatcgaaattcatatgtc
tggaatcttgaaggatcagagtgggtacccactcttgttatccttaggctaaaccgtgct
gctctttgtgttcagtggagtccaaaagaaaacaaattcgcggtgggaagtggagccaaa
actgtttgtatatgctattatgagcaggagaacaactggtgggtcagcaaacttataagg
aaaagacatgactcttcagtgacaagtgtttcatggcatcccaataatattcttcttgca
acaacatccacggatgggaaatgccgagtattttccacctttataaaaggcgtagatgca
aaggattcaataaagggtactttatcagattcaaaatttggagagttaattgttcagctt
gatctctcatcatcttggacattcggagtcaagtggtcaccaagtggcaatactctagct
tatgtaggtcataattctatgatttattttgttgatgatgttggtccttctcctctggca
caaaatgtcgtgttccgtgatttgcctctccgtgatgtactatttgtttctgagagaact
gttataggtgtgggattcgactgtaacccaatggtttttgctgctgatgaaagaggaatt
tggagttttatcagatatcttggggaacgaaaaacagcatcttctccatcaagatatggt
tcacagttttctgaagcatttgggaagttctatggccaatccaagcatggagtgagcaat
gatacagttgatacttcaagaacacgtggagctgttcatgaaaactgtataaattctatc
attcctcttggggagcatggggcattgacaaggcgtttcagcacatcaggattggatgga
agaattgttttatgggatttggaaaatgagcaagacatattggaattataa

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