Lotus japonicus: 130723950
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Entry
130723950 CDS
T04348
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130723950
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130723950
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130723950
NCBI-ProteinID:
XP_057431082
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Position
6:complement(21008660..21011654)
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AA seq
400 aa
AA seq
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MAFPIILMFLLLTPTLIFSSPVQDPESVVQEVQKSIIEHRRKLGFYSCGTGNPIDDCWRC
DPNWENNRKRLAECAIGFGRHAIGGRDGKFYLVTDPSDHAVNPKPGTLRHAAIQQEPLWI
IFKHDMVIKLEMDLVMNSYKTIDGRGANVHIAGGPCIKVQRKTNIIIHGISIHDCKRGGS
GYVSDSPNHQSWRGRSDGDGVTIYDSSNVWVDHCSLSNCFDGLIDVVHGSTAITISNNYM
THHNKVMLLGHSDSNKEDKKMQVTIAFNHFGEGLGGRMPRCRFGYFHVVNNDYTHWQKYA
IGGSSSPTIFSQGNRFLAPNDEEHKEITKHFGSSENEWKNWNWRSEGDLMLNGAFFSPSG
AGATSTYARASSMEARPPMLVASMTAGAGALRCKKDYMCY
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcatttccgatcatactgatgttcttgcttcttacaccaactttgatcttttcttcc
ccagtccaagatcctgaatcagttgtccaggaagttcagaagagcatcattgagcatagg
agaaaattgggtttttattcatgtggaacaggcaaccccattgatgattgttggaggtgc
gaccccaattgggaaaacaaccgcaaacggctagcagaatgtgcaatcgggtttggcaga
catgccattggaggaagggatggcaagttttatctggtcacggaccccagtgaccacgca
gtgaaccccaagccaggaactctaagacacgctgcaatccaacaagagcccttgtggatc
atattcaagcatgacatggtgatcaagctcgagatggatctcgttatgaactcttacaag
accattgatggtagaggagctaatgtccacattgctggagggccttgcatcaaggtgcag
agaaagaccaacatcataatccatggcattagtatccatgactgcaaacgcggtggcagt
gggtacgtgagcgactctcctaaccatcagagctggagaggacgatcagacggtgatggg
gtcacgatttatgattcgagcaatgtttgggtggaccattgttctttgtcgaactgtttt
gatgggttgattgatgttgttcatggatcaacggctattaccatttcgaacaattacatg
acgcaccataacaaggtcatgctcttgggtcatagtgattccaataaagaggataaaaag
atgcaggttacgattgctttcaaccattttggagaaggacttgggggaagaatgcccagg
tgcaggttcggatatttccacgtggtgaacaatgattacacacattggcagaagtacgca
ataggtgggagttcatccccaactattttcagccaaggcaacagatttcttgctccaaat
gatgaagaacacaaagagatcaccaaacattttggatcatcggagaatgaatggaagaac
tggaactggaggtctgaaggggatttaatgctgaatggcgccttcttcagtccgtccgga
gccggtgcaacttctacatatgctagggcgtcaagcatggaagcaagaccaccaatgctt
gtggcttcaatgacagcaggggctggagctcttagatgcaagaaagactacatgtgctac
tag
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