KEGG   Lotus japonicus: 130723963
Entry
130723963         CDS       T04348                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lja  Lotus japonicus
Brite
KEGG Orthology (KO) [BR:lja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lja03041]
    130723963
Spliceosome [BR:lja03041]
 Complex B
  Other components
   Complex B specific factors
    130723963
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML NBCH_WD40 LisH_TPL Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_SCAP WD40_RFWD3 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st DUF7165 Beta-prop_WDR75_2nd Beta-prop_VPS8 VPS8_N Beta-prop_LRRK2 zf_topless Beta-prop_IFT122_2nd Beta-prop_ELP1_2nd Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 130723963
NCBI-ProteinID: XP_057431096
LinkDB
Position
6:48546339..48556288
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSIETFVADINSGRWDAI
LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKNEQPERYLRLEH
LLVRTYFDPNEAYQDSTKEKRRALIAQGIAAEVTVVPPSRLMGLIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTKSHAECACFSPDGQFLVSCSVDGFVEV
WDYISGKLKKDLQYQADEVFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSLSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTND
GSRVITASSDCTVKVWDVKTTDCIQTFKPPPPLRGGDASVNSVYIFPKNADHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLM
KVHEKEIIGVTHHPHRNLVATYSEDGTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctacgctcgaaatcgaagctcgagacgtaatcaaaatcgtgcttcaattctgcaaa
gaaaactccttacaccaaacgtttcagacactgcagagcgagtgccaggtttctctcaac
actgttgacagcattgaaaccttcgttgcggatatcaatagtggaagatgggatgccatt
ttgcctcaagtttcgcagctcaagcttccccggaataaattggaggatttgtatgagcag
attgtgttggaaatgattgagcttcgagagctggataccgcgcgtgccattttgaggcag
acgcaggtgatgggtgtcatgaaaaatgagcagccggaaagatatttgcgacttgagcat
cttttagttaggacttattttgacccaaatgaggcttaccaagactcaacaaaagagaag
cgacgtgcattaatagcccaaggtattgcagctgaagtgactgtagtgccaccttcccga
ttgatgggtttaattggtcaggctttgaagtggcagcagcatcaagggttacttcctcct
ggtacgcagtttgatttgtttcgtggaacggctgctatgaaacaagacgtggatgacatg
tatccaacaactctttctcacactataaagtttgggacaaaaagtcatgcagaatgtgct
tgcttttcaccagatgggcagtttctcgtatcctgttcagttgatggatttgttgaggtt
tgggattacataagtggaaagctgaagaaagatctccagtaccaggcagatgaggtattt
atgatgcatgatgatgctgtactttgtgtggactttagcagagattcagagatgctggca
tctggatcacaagatggaaaaattaaagtatggcgtattaggactggtcaatgcttgcgg
cgtcttgaacgtgcacattcccaaggtgttacaagtctttccttttctcgtgatgggagc
cagttattaagtacttcatttgacagcacagcaagaatccatggccttaagtccggaaag
atgttgaaagagtttcgcggccatacctcttacgtgaatgatgcaactttcaccaacgat
gggagccgtgttattacggcatcaagtgattgtacagtcaaggtctgggatgtgaagact
acagactgcatacaaacttttaagccacctcctcctttaaggggaggtgatgcttctgtt
aactctgtgtacattttccccaagaatgctgatcacattgttgtttgtaacaaaacgtca
tcaatatatatcatgacacttcaaggccaggttgtcaagagtttctcatctggtaaaaga
gagggtggagacttcgttgcagcctgtatttcacctaaaggggaatggatttactgtgtt
ggtgaagacaggaatatgtactgcttcagctatcagtctggcaaattggagcatctgatg
aaggtccatgagaaggaaattattggtgtcactcatcatcctcataggaatcttgttgca
acttatagtgaagacggcacaatgaaattgtggaaaccttga

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