Lotus japonicus: 130724014
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Entry
130724014 CDS
T04348
Name
(RefSeq) protein argonaute 16 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130724014
03036 Chromosome and associated proteins [BR:
lja03036
]
130724014
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130724014
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130724014
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130724014
microRNA pathway
RISC loading complex
130724014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
130724014
NCBI-ProteinID:
XP_057431155
LinkDB
All DBs
Position
6:complement(4344438..4353134)
Genome browser
AA seq
905 aa
AA seq
DB search
MEKVPEIEDPADAEPPPLSPSSPDVSPSIETVEADPIKFSIISRQGVGTAGKRIPVLTNL
FKVSVNAPDAIFFQYSVTIATEDKRVIESKGIGRKLIDRLYQTYSSELGGKRFAYDGDRT
LYTVGPLPQNKFEFKVLLEESFAKSSSAECPDANGSPRGETKRSKCSFQSKAFMVDISFT
AKIPLQSVALSLEGMGTDANCQDALRVLDTVLRQQAANRGCLLVRQSFYHDDSRNFSDVG
GGVTGVRGFHSSFNLKQGGLSLNMDVSTTVILKPGPVIDFLLSNQNVKEPRYIDWAKAKK
VLKNLRVLATHRKWEFKISGLSEKPCIQQLFSMKVKNGDNNDGEQTVDITVYEYFAEHCG
IELTSSAYLPCLDVGKPNRPIYLPLELCSLVPLQRYKKALSPVQRASLIEKSRQKPQDRI
KSLRNAVEDYHYDDDPVLAACGISIDKQLTQVEARVLETPKLKVGKNDDCIPQNGRWNFN
KKTFLQPSRIDFWAVVNFSARCDTSYITRELIKCGMSKGINIERPYTLIEEDAPMKKSNP
VARVEKMFDLLTSKLIREPKLILCVLPEKKNCDIYGPWKKKCLSEFGVVTQCISPLKITD
QYLTNVLLKINSKLGGINSLLTIELSGNLPLIEDTPTMILGMDVSHSSPGQSDVPSIAAV
VGSRLWPLISRYRASVRTQSSKVEIIDALYKPLDGGKDDGIIRELLLDFYESSNGRKPAQ
IIVFRDGVSESQFNQVLDIEVNQIIKAYQHLGEVDVPKFTVIVAQKNHHIKLFQANSVDN
VPPGTVVDTKIVHPRNYDFYLCAHAGMIGTSRPVHYNVLLDEIGFSPDSLQNLIHSLSYA
NQRSSIATSIVAPIHYAHHAAAQMRQVLNFDNLSETSSNLDSEGVVSIPELPRLHSNVKS
TMFFC
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtacctgagattgaagatcctgctgatgccgagccaccacctttatctccg
tcaagtcctgatgtgtcgcctagtatagaaacagtagaagccgatcctataaagttttct
atcatcagtaggcaaggggttgggactgctggaaaacgcatacccgtgcttaccaatctc
ttcaaagtttccgttaatgctccggatgcgattttcttccagtatagtgttactattgct
acggaagacaaaagagtcatcgaaagcaagggcattgggagaaaactgattgataggctt
taccaaacatactcttctgaacttggtggcaagaggtttgcatatgatggtgatagaact
ttatacacagtgggtcctctgccacagaataaattcgagttcaaagtattgcttgaggaa
tcgtttgcaaaatccagtagtgctgagtgtcctgatgctaatggaagccctcgtggggaa
actaaaaggtcaaaatgttcgtttcagtcaaaggctttcatggtggatataagttttact
gccaaaatacccctgcagtctgttgctctttcccttgaagggatggggacagatgctaat
tgtcaggatgctttgagagtgctagacactgtgctgaggcaacaagcagctaacagaggg
tgtctcttggtaagacaatctttttatcatgacgactcgaggaatttctctgatgttgga
ggtggagtaacaggagttcgagggtttcactccagttttaatcttaaacagggaggatta
tctcttaatatggatgtgtccaccacggtcatcttaaaacctggacctgtaattgatttt
ctcctatccaaccagaatgtgaaagaaccccgttatattgactgggcaaaggccaaaaaa
gtgcttaaaaatttaagggtgcttgcaacacatcgtaaatgggaatttaaaatttctggc
ttgagtgagaagccctgcattcagcaactttttagtatgaaggtgaaaaatggagacaac
aatgacggagaacagacagtagatattactgtatatgagtattttgctgaacactgtggc
atagagctgacttcttctgcttatcttccatgtcttgatgtggggaagccaaatcgtccc
atctatttgcccttggagctttgttcacttgttcccctccaacgatataaaaaggcatta
tctcccgtgcaaagagcatctttgattgaaaaatcacgccaaaagccgcaagatagaatc
aagtctctgagaaatgctgttgaagattatcactacgatgatgaccctgttcttgctgca
tgtggcatttctattgataaacaattgactcaggttgaagctcgggtacttgagacacca
aagttgaaggtcggtaagaatgatgactgcattccccaaaatggaaggtggaactttaat
aagaagacatttctacaaccatcacgtattgatttttgggctgttgttaatttttctgcc
cgttgtgatactagttacataacaagggagctgatcaaatgtggaatgagcaaaggcatt
aacattgaacggccatatactttaatagaggaagacgcacccatgaaaaaatctaatcct
gttgcaagggttgaaaagatgtttgacctacttacatcaaaacttattagagaaccaaag
ctgattctctgtgttttgccagagaagaaaaattgtgacatttacgggccttggaaaaag
aagtgtctgagtgaatttggtgttgtcacacagtgtatttcccctctgaagatcactgat
caataccttactaatgtactacttaaaatcaattctaagcttggaggaataaactcttta
ctgacaatagagctttccgggaatcttcccctaattgaagatactccaacaatgattttg
gggatggatgtgtctcatagttcccctggtcagtcagatgttccatcaatagcagcggtt
gttggatctcgtctttggcctctgatttcaaggtatagagcatctgtgagaacgcaatca
tctaaagtggagataattgatgctctttacaagcctttggatggtgggaaagatgatggt
attatcagagaattgcttctagatttctatgaatcaagtaatggtcgcaaaccagctcaa
attatcgtgttcagggatggagtcagtgaatcacagtttaatcaggttctggatattgag
gttaaccagattataaaggcctatcaacatcttggagaggttgatgttcccaagttcaca
gtaattgtggcgcagaagaatcatcatataaagctttttcaagctaattctgtggataat
gttcctcctggaacggttgtcgacacaaaaatcgtgcatccaagaaattacgatttctac
ttgtgtgctcatgctgggatgattggcacatctcggcctgtacattataatgtgttgctc
gatgagattggtttctctccggatagcttgcaaaatttaatccattcactgtcttatgca
aaccaaaggagctccattgcaacctcaattgtggcacctatacactatgcccaccacgct
gcagctcagatgagacaagttttgaattttgataatttatcagaaacatcttcaaatctt
gattcagagggagtcgtctccattcccgagctaccaaggttgcatagcaatgtcaagagt
accatgttcttctgctga
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