Lotus japonicus: 130724209
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Entry
130724209 CDS
T04348
Name
(RefSeq) preprotein translocase subunit SECY, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
lja
Lotus japonicus
Pathway
lja03060
Protein export
lja04141
Protein processing in endoplasmic reticulum
lja04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
130724209
04141 Protein processing in endoplasmic reticulum
130724209
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130724209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130724209
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lja02044
]
130724209
Membrane trafficking [BR:
lja04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
130724209
Secretion system [BR:
lja02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
130724209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
GPHR_N
Motif
Other DBs
NCBI-GeneID:
130724209
NCBI-ProteinID:
XP_057431381
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Position
6:complement(49495135..49498656)
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AA seq
536 aa
AA seq
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MLITVRQASSSPLCLFLDRLTVSKPSSKSFKTSICQAHRTPSPSHSWSSGNLSTSYEAAN
FDPLGINPDLSSGLSSTWKDLVCLFSQPFESTSSTEKGKPNSSRGVAAAIEDSSIDFGDF
FKGPLPGKFLKLLGFLVLSRLGVYIPLGGVNREAFIGNLDQNSLLSTLDSFSGGGIGRLG
LCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQ
VLFLRPYVNDFSTEWVISSVILLTLGSAFTTYIGERITDLKLGNGTSLLIFTNIISYLPA
SFGRTFSEAFNDANYVGLATIIVSFFLLVVGIVYVQEAERKIPLNYASRLTRSSGLEKSA
YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSPLKSAAMALNPGGSFYLPFNIFLIAF
FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAG
PAVVEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKKY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacggtcagacaagcttcatcttctcccctctgtctcttccttgatcgcctc
accgtctcaaaaccctcctctaaatcattcaaaacttccatttgccaagctcacagaaca
ccctcaccctcccattcatggagttctgggaatctctctaccagctatgaggctgcaaat
tttgatcccttgggtatcaacccagatttatcttctggactgagttctacatggaaagat
cttgtgtgcttgttttcgcaaccatttgagagcacttcaagtacagaaaaggggaaacct
aactcgtcgcgaggagtagcagctgcaattgaggacagttcaattgattttggcgacttc
ttcaaaggtccactgccagggaagtttctgaagcttttggggtttcttgtcttgtcacgg
cttggtgtgtacatacctctaggtggggttaatagggaggcttttattgggaatttggat
cagaacagtttgttaagcactctggactcattttctggtggaggtattggtagacttggg
ctgtgttccctcggtattgttcccttcatcaatgcgcaaattgttttccagcttcttgca
caagtataccccaagttgcaagatcttcagaaacgagagggtgaggctggaagaaagaaa
attcttcagtacactcgatatgcttcagttggatttgccattgtacaggcgattggccaa
gttcttttcctacgcccctatgtcaatgacttctcaacagagtgggttatttcctctgtt
atcttattgacacttggttctgcgtttacaacgtacatcggcgaacgaattactgaccta
aaacttgggaatggcacatctcttttgattttcacaaacattatctcctacttgccagct
tcctttggtcgaacattctcagaagcatttaatgatgctaactatgttggacttgctacc
atcattgtgtccttctttttgttggtagttggtattgtctatgttcaggaagcggagaga
aaaatacctcttaattatgcttctagactcaccagaagcagtggacttgaaaaatctgct
tacctaccctttaaggtaaatagttcaggagtgatgcccatcatattttctacttcatcg
ttagctcttcctggtactttagcacgcttcactggtttaagtccactaaagagtgcggca
atggctttgaatcctggaggttccttctatcttccatttaacatatttttgatagccttc
ttcaactactattacactttcctacaactggaccctgatgatgtgagtgagcaattgaaa
cgtcaaggtgcttcaattccacttgtcagaccaggcagaagtacagctacatttatcaaa
acagttcttagtcgaatatcagttctgggttcaacatttttggcgatcttggctgctggt
ccagcagtagttgagcaaaccacacacttgactgcattccgggggtttgctggaacatct
attcttattcttgttggttgtgcaacagacacagcaaggaaagttcaggctgagattata
tcccaaaagtacaagaacattgagttctatgactttgataaaaagtattga
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