Lotus japonicus: 130724348
Help
Entry
130724348 CDS
T04348
Name
(RefSeq) RHOMBOID-like protein 10, chloroplastic isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lja01002
]
130724348
Enzymes [BR:
lja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
130724348
Peptidases and inhibitors [BR:
lja01002
]
Serine peptidases
Family S54: Rhomboid family
130724348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
DUF1751
Motif
Other DBs
NCBI-GeneID:
130724348
NCBI-ProteinID:
XP_057431537
LinkDB
All DBs
Position
6:complement(67064724..67067808)
Genome browser
AA seq
338 aa
AA seq
DB search
MVGLNFVPQPFLSPVYKAGPYPLDLIATAACLHFGHLLRHRLRLGVLLRSCLKKLAPLHR
HVFKLKDKWCQRCLQLEGMNYLLSSSDDLASTCSTSFSFFNGGGHGGHFGNAGMSDSKMS
GKNPFNRRKWTNILLAANVLFFIAQLATQGKLLLWGAKVNSLIDKGQIWRLATSSFLHAN
IGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIASSAMSYWFCKMPAVGASGAIFGL
VGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIGILSRGIDNWGHLGGLLGGVAASWL
IGPAWKHESTSWDGRRIFTDSAPMYTLLKIRRVPKQWK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggtaggattgaattttgtgcctcagccatttttgtcaccagtttacaaggcgggtcct
tacccacttgatctcatcgccaccgccgcttgcctccacttcggccaccttctccgccac
cgtctccgcctcggggttcttcttcgctcctgtctcaagaaactcgctcctttacatcgt
cacgtgtttaaattgaaagataaatggtgccaaagatgccttcaactcgaaggaatgaat
tatcttctatcgtcaagtgatgatttggcttctacatgttcaactagtttctctttcttt
aacgggggaggacatggaggccactttggaaatgctggcatgtccgactccaagatgtct
ggaaaaaatccatttaacagaaggaagtggacaaatattctccttgctgctaatgttttg
tttttcattgcacagcttgcaacccaaggcaagcttttattatggggagcgaaggtaaac
agcctcattgacaagggacaaatttggagacttgccacatcatcctttttgcatgcaaac
attgggcaccttatgataaactgtttttccttaaattcagtcggtccaactgtggagaga
tttagtggtcctcgaagattcctagcagtttactttatatcagcaattgcaagttcagct
atgagttattggttctgcaaaatgcccgcagtaggtgcatcaggagcaatttttggactt
gttggatcggttgcagtgtttgtcttaaggcacagagacattgtaggaggtggtaaagaa
gacttgcagcacatagcacgtgtaattgtcctcaatatggttattggaatattatccaga
ggcattgacaattggggacatttaggaggcttgcttggtggagttgctgcatcatggctt
attggaccggcatggaagcatgaatctacatcttgggatggaagaagaattttcactgac
agtgcaccgatgtatactctgctcaagattagaagggtacctaagcaatggaaatag
DBGET
integrated database retrieval system
