Lotus japonicus: 130724548
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Entry
130724548 CDS
T04348
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
lja04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130724548
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130724548
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
130724548
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130724548
03036 Chromosome and associated proteins [BR:
lja03036
]
130724548
Protein phosphatases and associated proteins [BR:
lja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130724548
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130724548
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130724548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
130724548
NCBI-ProteinID:
XP_057431791
LinkDB
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Position
6:complement(49380539..49386608)
Genome browser
AA seq
544 aa
AA seq
DB search
MIKQMLSKLPRRPSKSSHSDSNSDGGVVNDGVGSNVTLKINSASSKSLNFGSGGSDEGNW
TFVLPSTSSGKTNQAKLSIIPPRKPSKSAPAVASQVGSVMAQSVYEALPAFRDVPSSEKP
NLFIRKLSMCCVVFDFNDPAKHLKEKDVKRQTLLELVDYISSVNSKFNELTMQEVTKMVA
ANLFRTLPSSNHDGKVADAYDVDEEEPTFEPAWSHLQIVYEILYRFVASSETDAKLAKRY
IDHSFVLKLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAINNIFYQFMFETEKH
NGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHRPKCVSMYHQQLSYCITLFVEKD
VKLANTVIRGILKYWPVTNSSKEVMFLGELEEVLEATQPAEFQRCVVPLFRQIGRCLNSL
HFQVAERALFLWNNDHIRNLILQNCKAILPIILPALETNTQGHWNQAVQSLTLNVRKIFS
DADQALFDECLMRFQEDEINERQKQEKRESIWKKLEDVAASKAVSNEPVLASRFMSSVAI
STRS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagatgcttagtaaattaccacgcaggccttcaaaatcatctcacagtgat
tctaatagtgatggaggggtggtcaatgatggggttggttccaatgtcaccttgaaaatc
aattcagcttcttcaaaatctttgaatttcggttcgggtgggtcggatgaggggaattgg
acttttgtactgccctctacgagttcaggtaaaacaaaccaagctaagcttagtataata
ccaccacgcaagccttcgaaatcagctcctgcagttgcatctcaagttggttctgtaatg
gctcaaagtgtttatgaggctttgccggcttttagagatgttcctagttcagaaaagccg
aatctttttatcaggaagttgagtatgtgttgtgttgtgtttgattttaatgatcctgcg
aagcatcttaaagagaaggacgtcaagaggcaaactttgcttgagcttgttgattatatt
tcgtccgtgaattcgaagttcaatgaattgacaatgcaggaggtcacgaagatggtggcg
gcaaacttgtttcgaactctgccgtcttctaatcatgatggtaaggttgcagatgcttat
gatgttgacgaagaggaacccacgtttgaaccagcatggagtcatctgcagattgtgtat
gaaattctctataggtttgtggcttcatcagagacagatgcgaagcttgctaaacgatac
attgatcattcatttgtgttgaaacttcttgacctctttgactctgaggaccaaagagag
agggaatacttgaagactattctccaccgcatttatgggaagttcatggtacatcggcct
ttcattaggaaagctatcaacaatatcttttaccagttcatgtttgagactgagaaacac
aatggaattgcagagttgctggagatattgggaagcataattaatggattcgctctacct
ttgaaagaagagcataagctgttccttgtccgtgctctgatccctcttcacaggccgaag
tgtgtctctatgtatcatcaacagctttcctattgcatcactctatttgttgaaaaagat
gtcaagttagcaaatacggtgattagaggcattttgaaatattggcccgttactaatagt
tcaaaggaggtaatgttccttggtgaactggaggaagttttagaagccactcaacccgca
gaatttcagcgatgtgtggtgccattgtttcgtcaaattggtagatgcctcaacagccta
cacttccaggttgctgaaagggcactgtttctgtggaacaatgatcatattcgaaatttg
atattacaaaactgcaaagcaatactacctataatcttgcctgctttggagacaaataca
cagggccactggaaccaagcagttcagagtttgaccctgaacgtgagaaaaatattctca
gatgctgaccaggcactttttgatgagtgcttgatgagattccaagaagatgaaatcaat
gaacggcagaagcaagagaagcgggaatccatctggaagaaattggaagatgtggcggca
tcgaaggctgtaagcaatgaacccgtccttgcctcaagattcatgtcctctgtagccatt
tctactaggagctaa
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