Lotus japonicus: 130724617
Help
Entry
130724617 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130724617
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130724617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130724617
NCBI-ProteinID:
XP_057431872
LinkDB
All DBs
Position
6:7978083..7981360
Genome browser
AA seq
401 aa
AA seq
DB search
MKSLFTVLLMFIVATPSLYARLTPKEGSSFNVGFNIVNYGATGDGHTDDSEAFKRAWQDL
CGATEGTPTLLISNGSFVLQPMLFKGPCKLTAINIQVDGTIVAPESVIDWKWPDSNRGAW
IKFSGINDLVINGGGTFDGQGAPWWTRYNDPDYKPTALQFHNCNNSALSGLTHINSPRNH
ISIDSCNDFSISNIHIIAPEDSHNTDGIDISKSSNLLIENSKIETGDDCIAINSGSSFIN
ITGVTCGPGHGISVGSLGRNGAYETVEEIHVKYSTFTGTTNGARIKTWMGGSGYARKITF
EHIILIGARNPVIIDQQYHDYAISDLNSAVRVSDVTYYNFTGTSTSQDAITLNCDTNVGC
IDIVLNDLNITFADGGETLASCNNAHGTFSSCYPSISCLSS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcctatttactgtccttttaatgttcattgttgctacacctagcttgtatgct
agattaacacctaaggaaggttctagcttcaatgttggcttcaatattgttaactatggt
gcaaccggcgatggtcatacggatgattcagaagcttttaagagagcatggcaagacttg
tgtggtgcaactgaaggcaccccaacacttctcatatctaatggatcattcgtgttgcaa
cccatgttgttcaagggtccttgtaaacttactgctattaacattcaggttgatggcact
atcgttgccccggaaagtgttattgattggaaatggccagatagtaatagaggggcatgg
attaagttctcgggcataaatgaccttgttatcaatggaggaggaacatttgatggccaa
ggtgctccatggtggacacggtacaatgacccggattacaagccaactgcacttcaattc
cataattgtaataattccgcacttagcgggttgacccacatcaacagcccaagaaatcac
ataagcatcgattcgtgtaatgactttagcatctcaaacattcatattattgctccggag
gatagtcataacaccgacgggattgatatctcaaaatcatctaacctcctcatagagaat
tccaagattgaaaccggggacgactgcattgccattaatagtggttcctccttcatcaac
ataactggtgttacatgtggtcctggccatggcatcagtgttgggagtcttgggagaaac
ggagcgtatgaaaccgtagaagagatacatgtcaaatatagcaccttcacaggaactacg
aatggagctagaataaagacatggatgggaggatccgggtatgctaggaaaattacattt
gaacatattatactaattggagcacggaaccctgtgattattgaccagcaatatcatgat
tatgcaataagtgatctaaactcggcagtgcgagtgagtgatgttacttactataacttc
acaggaacctcgacttctcaggatgcaatcacattgaattgtgacactaacgttggctgc
atcgacatagtattgaatgatctcaacataacctttgcagatggaggggaaacacttgca
tcgtgtaataacgctcatggaacattctcttcatgttatccaagtatctcatgtctttct
tcatga
DBGET
integrated database retrieval system
