Lotus japonicus: 130724791
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Entry
130724791 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130724791
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130724791
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
130724791
NCBI-ProteinID:
XP_057432054
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Position
6:complement(6510023..6513137)
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AA seq
355 aa
AA seq
DB search
MLFKGPCKSGTINIEGTIVAPKTQGAWKWGGINKGAWVKFSGISNLVIQGGGKIDGEGAS
WWQTYPEITPNALQFHQCKNLRLSNLTHINSPKIHISIYSCNDFSIANIHIIAPEKSQST
DGIDITRSSNILVENSNIETGGDCIAINNGSTFINITGVTCGPGHGISVGSLGKNNTYET
AEEIYVHNCTFIGTQNGARIKTWRWLTGFGSNHSSLLLLHDIVDFHYAVWVLVHSSFRSF
GTPGGSGYARKITFEDIILVGANNPIIIDEQFYAIGHNDIHTGVQVSDVTYDNVRGTTDS
NNAISLTCDDKVGCTNLVFNNINITTMSGSEPFVECYMAHGKCSSSFPNVTCLSA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaagggtccttgcaaaagtggcactattaacattgagggaactatcgtcgcc
ccaaaaacccaaggtgcttggaagtggggtggtattaataagggagcatgggtgaagttc
tcgggaataagtaaccttgtcatccagggaggaggaaaaatagatggagaaggtgcttct
tggtggcaaacttacccggaaattacaccaaatgcacttcaattccatcaatgtaagaat
ctaaggcttagcaacttgactcacatcaacagcccaaaaattcatataagcatatattca
tgcaatgactttagcatcgcgaacattcatattattgctccagagaaaagtcaatccacc
gacgggattgatatcacaagatcatctaacatcctcgttgagaattctaatattgaaaca
gggggtgactgcattgccattaataatggttccaccttcatcaacataactggtgttaca
tgtggtcctggtcatggcataagtgttgggagtcttggaaaaaacaatacatatgaaacg
gcagaagagatatatgtacacaattgtaccttcataggaactcaaaatggagctagaatc
aagacatggaggtggcttactggctttggttccaatcactcttctctacttctgttacat
gacattgttgattttcattatgctgtctgggttctagttcactcttcttttcgtagtttt
ggaacaccgggaggatctggatacgcaagaaaaataacatttgaagatatcatacttgtt
ggagcaaataaccctattatcattgacgaacagttttatgctattggacataatgatata
cacacgggagtgcaagtgagtgatgtgacttatgacaatgtgaggggaaccacagattct
aataatgcaatctcattgacatgtgacgacaaagttggttgcaccaatcttgtattcaat
aatattaatataaccactatgagtggatcagaaccatttgtagaatgctatatggcacat
gggaaatgctcttcgagttttccaaatgtcacatgtctttctgcatag
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