Lotus japonicus: 130725082
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Entry
130725082 CDS
T04348
Name
(RefSeq) mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130725082
03015 mRNA surveillance pathway
130725082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130725082
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130725082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
130725082
NCBI-ProteinID:
XP_057432321
LinkDB
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Position
6:complement(20632805..20646319)
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AA seq
687 aa
AA seq
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MGGAVKLELHCCSQRVDGIAVDPEPDWSFDALVSELNALETKLATTSTKPSSLNKTTSRG
NEIERGRTFTLHAHEYEMEDSESEDDYVNDDRALAVAGKRITCDELYLSDSDDSDVMSTF
EGQPYLMDEVEEVEGALFELTHEHQLRVKDEIRSKISVLETALVMESENSTSSLLRVEKY
KETRRELDKKFDTQYQRRIAEELDNHLTVVQQDRERRSQIEERKIRNDAANEEAKRKIAL
QEEKQQQEKAKAEAEAKLRAEEAKQAALEAERKAVMEANTKAAMEAEKRATAEAEKRAEK
ETIGNSKRVTSGVTQQEAAGRSTDSASSLSNVETKESGIGLPFSHFELCQFCSLPASPDL
ILLWLPFSNVYQAAASALNLEHGRLQKLNELCERNQLIRSSSNRGVLTFLVARTDVGVVL
IFFQDFTRHENHIFRNIKTIRGSRDSVRSKASELIKLLNDPQYPQSISVETFAKTVISNS
KAPGSAPFASAYVIVLVTSQVPHAMDILLAELHRVCPYTVPKHMVYKKSTFHSREAYLKS
IGYWEENGKMENTEDYLQRLESYVKMYAALVQTEVPKVQNLHGLQHGWAWLARFLNALPA
NQYTAVSLDAFLRMAGFALFRRYKSQFLKMLNVISENFLVDIKSLNAPELRKTVAEIQTY
IEDKMFLQEPEGRSLQTNLLSKECVVR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggggggagctgtgaaattggagctccattgttgttcgcaaagagtggatggcattgct
gttgatcctgaacctgattggagctttgatgctcttgtctcagaactcaatgctttggaa
acgaaactcgctactacttctaccaaaccttcgtctctcaataaaacaacatcccgtggg
aatgaaattgagagaggtagaactttcacattgcatgcacatgaatatgagatggaagac
tcagaaagtgaagacgattatgttaatgatgacagagctttagcagtagctggcaaacga
atcacttgtgatgaactttatctgagtgacagtgatgattctgatgttatgtctactttt
gaagggcaaccctacctgatggatgaagtggaggaggtagaaggtgccttgtttgagttg
acccacgagcaccagctaagggttaaggatgaaataaggagtaagatctcagtgttggag
acagctctggtgatggaaagtgaaaactctacttcttcccttctgcgagtggagaaatat
aaagaaacaaggcgggaattggataaaaagtttgacactcaatatcagcgtcgcattgca
gaagaacttgataatcacttgacagttgttcaacaggaccgtgaacgtagatcacagata
gaagaaaggaaaataagaaatgatgcagccaatgaagaagccaagagaaagattgctttg
caggaggaaaagcagcagcaagaaaaggctaaagctgaagcagaggcaaaacttagagct
gaagaagcaaaacaagctgcattggaagctgagagaaaagcagtaatggaagccaacaca
aaggcagcaatggaagctgaaaaaagagcaacagcagaagctgaaaaaagagcagaaaag
gagaccataggaaattcgaaaagggttacttctggagtgacccaacaagaagctgctggg
cgttcaacagattctgcatcaagcctatccaatgtggaaaccaaggaatctggtataggt
ttgcctttttcacattttgaactgtgtcagttttgtagtttacctgcttctccagatcta
atattgctttggcttccatttagtaatgtgtatcaagctgctgcaagtgctttaaatcta
gagcatgggaggctacagaaactgaatgagctatgtgagagaaaccaattgataagatca
agttctaataggggggtactaacttttctagtagcacgcactgatgttggtgttgtgttg
atattttttcaggattttacccgccatgagaatcatattttccggaatataaagacaatt
aggggcagtagagacagtgtgagatcaaaagcaagtgagttgattaaacttttgaatgat
cctcaatatcctcaatcaatcagcgtggagacatttgctaaaacggtcatttcaaactct
aaagcccctggtagtgctccgtttgcaagtgcctatgtcattgtccttgttacatctcag
gtcccacatgcaatggatattttgctagctgagcttcacagggtgtgcccatacactgtc
ccaaaacatatggtttacaaaaagtctacctttcattcaagagaggcatacctcaaaagc
attggttattgggaagaaaatggaaagatggagaatacagaagattatttacagcggtta
gaatcgtatgtgaagatgtatgctgcactggttcagactgaggttcctaaggttcagaat
ttgcatggcttacaacatggttgggcatggcttgccaggttcttgaatgctcttccagcc
aatcaatatacagctgtttcgctcgatgcattcttgcgaatggctggatttgctctcttt
agaagatataaatctcaattcctaaagatgttgaatgtcatctcagagaactttttagtt
gatataaaatcactaaatgcaccagaattgagaaagactgttgcagagatacagacttat
atagaagataagatgttccttcaagagccagaaggaaggagcctgcaaactaatttgtta
tcgaaggaatgtgttgttcgttga
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