Lotus japonicus: 130725662
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Entry
130725662 CDS
T04348
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130725662
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130725662
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF3737
NosD
Motif
Other DBs
NCBI-GeneID:
130725662
NCBI-ProteinID:
XP_057432854
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Position
6:complement(59194597..59196750)
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AA seq
410 aa
AA seq
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MANATTKHSPLPPNSLVVLHALLYFLLFYFNSLTLARPSTYNVVDFGANPNGETDSTDAF
LDTWNKACYSLEPTAIHVPQGKFLLGRDITFRGRGCVSKAAMISITIDGTLVAPSDYHVL
GNAESWITFNGVSGVSIHGGVLDGQGASLWDCKSELLKTCTIGASTLEFSNSNNIVITGL
TSLNSQLFHIIFKGCQNVRVHGVTIMAAGNSPNTDGIHVQSSSDVTILEPRIRTGDDCIS
IGPGTTNLWIENVTCGPGHGISIGSLGWGLNEAGVKNVTVKSATFFKTQNGFRIKSWGRP
SSEFVRHVHFEHAIMTDVQNPIVIDQNYCPFYRGCPSEASGIMIGDVSYKDIHGTSATQV
AVKFDCSSEHPCSRIKLEDVKLTYMKQPPQALCNHAAGTALGTIQPESCL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcaacaacaaaacatagtcctcttcctcctaattctctcgttgttcttcac
gcactgttgtactttctattgttctatttcaattcactaacattagccagaccaagcacc
tacaatgtggtcgattttggagccaacccgaatggtgaaaccgactcaaccgacgccttc
ctggacacgtggaacaaagcttgttactcgcttgaacccaccgccattcacgtgccacaa
gggaagttcttactgggaagggacatcacgttccgggggagaggttgtgttagcaaggcg
gctatgatctccataaccattgatggcaccttggtggctccttctgattaccacgtattg
ggaaacgcggagagttggataacattcaatggcgttagtggggtttccattcacggtggg
gtgcttgatggtcaaggtgcttccttgtgggattgcaagagcgagttactaaaaacttgc
acaattggagcctcgacacttgaattcagcaattcaaacaacattgtgatcactgggttg
acctctcttaatagtcaactgttccacataatcttcaaaggatgccagaatgtaagagtg
catggagtgacgatcatggctgccggaaacagccctaataccgacggcatccacgtccag
tcctcctctgatgtgaccatcctcgaacctagaatccgaacgggagatgattgtatctct
atcggccctggcactaccaacttgtggattgaaaatgttacatgtggacctggccatgga
ataagcattggaagtttaggatggggcttgaatgaagcaggagtgaaaaatgtaacagtg
aaatcagctacattttttaagacacaaaatggcttcagaataaagtcttgggggagaccc
agcagtgaatttgtgagacatgtccattttgaacatgcaatcatgactgatgtccaaaac
ccaattgtcatagaccaaaattactgcccattttaccggggctgccccagtgaggcttct
gggattatgattggggatgtttcatacaaggatattcatggaacatccgcaacacaagtt
gctgtgaaatttgactgcagttcagagcacccatgcagtaggataaagttggaagatgtg
aagctcacttacatgaaacaacctccccaagctttgtgtaaccacgccgctggaaccgcg
ttgggtacgattcaaccggagagttgcttgtag
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