Lotus japonicus: 130725838
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Entry
130725838 CDS
T04348
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130725838
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130725838
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130725838
NCBI-ProteinID:
XP_057433010
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Position
6:complement(21034365..21037004)
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AA seq
401 aa
AA seq
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MAIPTPFLLLLLFLLPSFIFSSPVQDPELVVEEVQRSINASRRNLAFLSCGTGNPIDDCW
RCDPNWAKNRKRLADCAIGFGKHAIGGRDGKIYIVTDPGDHAVNPKPGTLRYGVIQEEPL
WIIFKRDMVIKLKQELMMNSFKTIDGRGANVHIAGGPCITVQFVTNIIIHGINIHDCKRG
GNTYVRDSPSHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDVIHGSTAITISNN
YMTHHNKVMLLGHSDSFTRDKTMQVTVAFNHFGEGLVQRMPRCRYGYFHVVNNDYTQWAM
YAIGGSASPTINSQGNRFFAPNDGTFKEVTKRENSPQSQWKNWNWRSSGDLMLNGAFFTA
SGAGSSSSYARASSLAAKSSSLVSTITASAGSLSCKKGSRC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccaaccccatttctgttactcttgctatttcttttaccttccttcattttc
tcttccccagttcaagatcctgaattagtagtcgaagaagtacaaaggagcattaatgcc
tcaaggagaaacttagcatttctttcatgtgggacaggaaaccccattgatgattgttgg
aggtgtgacccgaattgggcaaagaatcgtaagcgcctagcagattgtgccattggattt
ggcaagcacgccattggaggcagagatggtaaaatctacatagtcactgacccaggtgat
catgcagtgaacccaaagccaggaacattaagatacggtgtgatccaagaagaaccacta
tggatcatcttcaaacgtgacatggtgatcaagctgaaacaagagctcatgatgaactca
ttcaaaaccattgacggtagaggagcaaacgtgcatatagctggtggaccatgcatcact
gtgcaatttgtgacaaacatcatcatccatgggatcaacatccatgactgcaaaagagga
gggaatacttatgtgagagactcaccttcacattatggttggaggacactctctgatggt
gatggggtttctatcttcggtgggagccatgtttgggtggaccattgttctctgtccaat
tgccgtgatggattgattgatgtcattcatggatctacagctatcactatctctaacaat
tacatgacccaccataacaaggtcatgcttttgggccatagtgattctttcactcgtgat
aagactatgcaggtcaccgttgccttcaaccattttggagaagggctagtgcagaggatg
ccaagatgcaggtatggatacttccatgtggtaaacaatgactacacgcaatgggcaatg
tatgccataggtgggagtgcttctccaaccatcaatagccaaggcaatagattttttgct
cctaatgatgggaccttcaaagaggtaacaaagcgtgagaattcaccacagagccaatgg
aagaattggaattggagatcttcaggggatttgatgttaaacggtgccttctttacagca
tcaggggcaggttcttcttcaagctatgccagagcatcaagtttggcagcaaaatcatca
tcattggtcagtactatcacagcatcagctggatcacttagctgcaaaaagggctcccgc
tgctag
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