Lotus japonicus: 130726071
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Entry
130726071 CDS
T04348
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130726071
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
90S particles
Other 90S particles
130726071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_like
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
130726071
NCBI-ProteinID:
XP_057433277
LinkDB
All DBs
Position
6:complement(58754496..58758746)
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AA seq
500 aa
AA seq
DB search
MPGKNRKKKGNDRDPFFTDDSRKRRKIEDDAEIDSDFEEDGFFAGGGGKGDKDQPEEVEE
EETGAEARKRIAQDYLRRVREITQKEKEQQSDEDDDDDEDEDEGARDSLVAQRLLQDQQE
ESGRVRRAISSRVQLGGDFGVLVKHRHSVTAVALSEDDSKGFSASKDGTIMHWDVDSGKS
ERYKWPSDSVLKSHGLKDPQGSASRQSKQVLALAVSSDGRYLSTGGLDRHVHIWDTRTRE
HVQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNVEDRTYMNTLFGHQSEVLSIDCL
RKERVLTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFLSNDEYLSGSDDGSIELWGMK
RKKPVYILRNAHALSTDSLKSDQKDIERLPNGNLENGHHHPENHHCLSTFSWVSAVTVCR
NSDLGASGAGNGSVRLYAIDSETNDIKSLYNVPLVGFVNSLAFAKSAQFLIAGVGQEPRL
GRWGRIPEARNGVSILPLKL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcaagaatcgtaagaagaagggcaatgaccgtgaccccttcttcaccgacgac
tctcgtaaacgccgcaaaatcgaagatgacgccgagattgacagcgatttcgaggaagac
ggcttcttcgccggcggcggcggcaaaggtgacaaggatcaacccgaagaagtagaggaa
gaagagaccggtgcggaagccaggaagagaatcgcacaggactatctgagaagggttcgg
gaaatcacgcagaaagagaaggagcaacaatcagatgaagatgatgatgatgatgaagat
gaggatgaaggagctagagactccctcgtagctcagagattgttgcaggatcagcaagag
gagagtgggcgcgttagaagagccatttcttcaagggtgcaattaggtggtgattttggg
gtgttggttaagcaccggcatagtgtgactgcggtggctctatctgaggacgattcgaag
gggttttcggcttccaaagatggaaccattatgcactgggatgtggatagtggaaaaagc
gagaggtataaatggccaagtgattcggtgctcaagtctcatggcttgaaggatccgcaa
ggttctgcttcgaggcaaagtaagcaggttttggctttggctgtgagttcggatggtcga
tatttgtctactgggggccttgatcgccatgttcatatatgggatactcgcaccagagag
catgttcaggcttttccaggtcatagaggccctgtttcttgtctgacttttagacaagga
acgtcagagcttttttctggttcatttgatcgaacagttaagatatggaatgttgaagac
agaacttacatgaacactctatttggccaccaaagtgaagtattgagtattgattgctta
cgtaaagaaagggtacttactgctggacgtgatcgtagtatgcagttgtttaaggttcat
gaagaatcacgtcttgtatttcgtgcacctgcatcttccttagaatgctgttgttttctg
agtaacgatgaatacttgtctgggtccgatgacggaagcattgagctttggggtatgaag
cgaaaaaaacctgtttatattttgaggaatgctcacgctttatcaacggatagcttgaaa
tctgaccaaaaggatattgaaagactccccaatggtaacctagaaaatggtcaccaccat
cctgagaatcatcactgtttgtcaacattttcttgggtcagtgcggtcactgtttgtaga
aacagtgaccttggtgcgtccggagctggtaatggttctgttcgattatatgcaattgac
agtgagaccaatgacatcaaatccctttataacgtgccattggttgggtttgtgaattcc
ttggcttttgcaaaatcagcacaattcctaattgctggagttgggcaggaacctcgtcta
ggaaggtggggacgaatccctgaagctcggaatggagtttcaattcttcctctcaagtta
tga
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