Lotus japonicus: 130726220
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Entry
130726220 CDS
T04348
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130726220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130726220
03036 Chromosome and associated proteins [BR:
lja03036
]
130726220
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130726220
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130726220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
130726220
NCBI-ProteinID:
XP_057433438
LinkDB
All DBs
Position
6:66652817..66658502
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AA seq
344 aa
AA seq
DB search
MSTFLSNTNQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAP
KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPE
MSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNP
QVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHREGNE
IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSIFAY
SVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPRIGATGRK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttcttatcaaacaccaatcaaaaccctaacaaatccttcgaggtgaatcag
cctccgtctgattctgtctccagtctctgtttcagccccaaagctaacctcctcgtcgcc
acttcctgggacaaccaggttcgatgctgggaagttgctcgcaatgttgccactgccccc
aaagcttccatctctcatgatcaaccggttctgtgttctgcttggaaggacgacggcacc
actgtcttctccggtggatgtgacaagcaagtcaagatgtggcctctcttgtctggagga
caaccgatgactgtcgccatgcacgatgcacccgttaaagacattgcttggattcctgag
atgagccttttagtcacaggaagctgggacaggactatcaagtattgggatactaggcag
ccaaatccagtgcatacacaacaactcccagagcgctgctatgcaatgtcagttaaacat
cctctgatggttgttggcacagctgatagaaatatcttggtctacaacttgcaaaatcct
caggttgaattcaagagaatcatttcacctttaaagtatcagacaaggtgtctcgctgca
ttccctgaccaacaaggtttcttggttggatcaatagaaggaagagttggggtacatcat
ttggatgatagtcagcagggtaaaaatttcacttttaaatgccacagagaggggaatgaa
atatattcagtcaactctttaaacttccatcctgtacaccacacctttgcaactgctggt
tctgatggtgcttttaatttttgggacaaagatagtaaacagaggcttaaggccatgtta
agatgcagccaacctattccttgcagtgcattcaacaatgatggctcaatatttgcttac
tcagtctgctatgactggagtaaaggggcagaaaatcataatcccacaacagcaaaaacc
aacatttacctgcacttgccacaggagtctgaggttaagggcaaaccacgcatcggtgct
actggtcgaaagtag
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