KEGG   Lotus japonicus: 130726241
Entry
130726241         CDS       T04348                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lja  Lotus japonicus
Pathway
lja03020  RNA polymerase
lja03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130726241
  09124 Replication and repair
   03420 Nucleotide excision repair
    130726241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    130726241
   03400 DNA repair and recombination proteins [BR:lja03400]
    130726241
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     130726241
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130726241
SSDB
Motif
Pfam: RNA_pol_Rpb4 INT_SG_DDX_CT_C
Other DBs
NCBI-GeneID: 130726241
NCBI-ProteinID: XP_057433461
LinkDB
Position
6:complement(59734654..59738594)
AA seq 200 aa
MSDKTGKGFTPFGKAGSLKGKDDSTPKSAQGRKAQFSKEGPFQSRMNGSPTPGGKGEKED
KAANGGKTSGSQDLKIDRELPANVKCLMDCEAADILQGIQEQMVTLSRDPTIKLPGPFDK
GLQYAKSSSKYTNAKSIRRIVEPLANNGLTDCEVCVIANVCPETVDEIYALLPSLKGKIN
LNRQLLEDSVSELAKLRRPV
NT seq 603 nt   +upstreamnt  +downstreamnt
atgtcggacaaaacaggaaagggctttacgccgtttggcaaagcaggatccctgaaaggg
aaagatgacagtacaccaaaatcagcacagggaaggaaggctcagttttccaaagaaggt
ccatttcaatccagaatgaatggttcaccgacacctggtggaaaaggtgaaaaggaggac
aaggctgcaaatggtggaaagacttcagggtcacaagaccttaaaattgatcgagaactt
ccagcaaatgtcaaatgcttgatggattgtgaggctgcagatattttacagggaattcaa
gagcagatggtcacgctatctagagatccaactatcaaactcccaggaccatttgacaag
gggctgcagtatgccaaaagcagtagcaagtatacaaatgccaagtccattagacgcatt
gttgagcctcttgcaaataatggtctcactgattgtgaggtatgtgtgattgctaatgtg
tgcccagaaactgttgatgaaatttatgctctcctcccatcattgaagggtaagataaac
cttaacagacaacttcttgaagattcagtgagtgagcttgctaagcttagacgaccagtc
taa

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