Lotus japonicus: 130726325
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Entry
130726325 CDS
T04348
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130726325
03029 Mitochondrial biogenesis [BR:
lja03029
]
130726325
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130726325
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130726325
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
130726325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Pif1_2B_dom
AAA_22
AAA_11
ATPase_2
PhoH
UvrD-helicase
Herpes_Helicase
AAA_16
DEAD
AAA_5
ResIII
SLFN-g3_helicase
NACHT
Mg_chelatase
AAA_7
NPHP3_N
NTPase_1
Sigma54_activat
nSTAND3
NB-ARC
TsaE
TrwB_AAD_bind
nSTAND6
T2SSE
UvrD_C_2
AAA_14
Viral_helicase1
AAA_18
RNA_helicase
AAA
Motif
Other DBs
NCBI-GeneID:
130726325
NCBI-ProteinID:
XP_057433558
LinkDB
All DBs
Position
6:45707679..45709888
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AA seq
529 aa
AA seq
DB search
MMRFFTIGIAVGSSCRSLSTKGCSSKPSSGSYIKYKNKGKTTTTTTERRQQRGKRIQWTE
EQKSVLSAVSQRSSVFITGSAGTGKTQLVTEVVKLLKKLHTKSKVFVTASTGVAAFALKG
QTLHSFAGIRYPVDDSEQLLRVIRSDKRASRRWQKVEALVIDEISMVDGRLFDNLQFVAK
ELKGVDKTWGGIQLVVVGDFCQLPPIADDASKVVKYAFEADCWNDSFSLQVELTRIFRQS
DPRFIEVLQGIRVGEVDQDDLSFLEKYCSEAECDPSAVQLYPLNRIVKKVNEEKLKSLQK
DVVFYRAVDDGWNSWKKLLSQGIAPDEISICLGARVMLVKNLKTWNGLVNGATGTVVKFV
KEAGIGDICSENLLPEVKFDSGKVEVIGPEEWHVTDGDVVVARRKQIPLILAWALSIHKC
QGMNLDKAYINLSGAFGCGMVYTALSRVKSLDGLHLSGFTPSSIRANPKVTNFYRNLVLQ
RDNKDTNNGCIERNQISNSITRDSEKAGTAENKYLFSLSDFLSRRLKGS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatgagatttttcaccattggaatagcggttggttcatcatgcagaagcttgagcaca
aagggttgttcttcaaaaccctcatctgggtcttacatcaagtacaagaacaagggtaag
acaacaacaacaacaacagagagaagacaacaacgtgggaagcggattcaatggactgag
gagcagaagagtgtgctgtctgctgtgagtcagaggagttctgtgtttattacaggctca
gctgggactggaaagacacaactggtcactgaggttgtcaagttgttgaagaaattgcac
accaagtctaaggtttttgtcacagcttccactggggttgcagcatttgctctcaagggt
caaactttgcactcatttgccgggattcgttaccccgttgatgattctgaacaattgttg
cgcgtgattaggtctgacaagagggcgtcgaggaggtggcaaaaggttgaagctttagtt
attgatgaaattagcatggtggatggaaggttgtttgataaccttcaatttgttgccaaa
gagttgaagggtgtggataaaacatggggtggaattcagctggttgtggttggggatttc
tgtcagttacccccaatcgctgatgatgcttccaaggttgtaaagtatgcttttgaagct
gattgttggaatgacagctttagtttgcaggtagagcttactaggatcttcaggcagtct
gatccgcggtttatcgaggttcttcaaggcataagggtgggggaagttgatcaggatgac
ttgtcattcctagagaaatattgctcggaggccgagtgtgatccctctgcagtgcagctc
tatccgttgaatagaatcgttaagaaagtgaatgaagagaagcttaaaagcttgcaaaag
gatgttgttttctatagagctgttgatgatggttggaattcttggaagaagctgctaagt
caggggatagcgcccgatgagatctccatttgtttaggtgcaagagttatgctggtcaag
aatttaaaaacttggaacggattagtgaatggagccacgggtacggttgtgaaatttgtt
aaggaagcgggcattggtgacatctgctccgaaaacctgctgccagaagtcaaatttgat
tcggggaaagttgaggtgattggaccagaagagtggcatgtaacggatggagatgtagtt
gttgctaggaggaagcagataccacttatattggcatgggctctgagcatccacaagtgc
cagggaatgaatcttgacaaagcttacatcaacttgtcaggagcatttggctgtggaatg
gtctacacagcactttctcgtgttaaaagcttggatggtcttcatttatctggttttacg
ccatcaagtattcgagcaaatcctaaggttacaaatttctataggaatttggttttgcaa
cgtgataacaaagatactaacaatggttgcattgagagaaatcaaatctctaatagcatt
accagagattcagaaaaagcaggcactgcagaaaacaagtaccttttttcactctctgat
ttcctatctagacgcctgaaaggatcctga
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