Lotus japonicus: 130726331
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Entry
130726331 CDS
T04348
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lja01002
]
130726331
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130726331
Enzymes [BR:
lja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130726331
Peptidases and inhibitors [BR:
lja01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130726331
Ubiquitin system [BR:
lja04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130726331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
LRR_LRWD1
Cys_rich_CPXG
Motif
Other DBs
NCBI-GeneID:
130726331
NCBI-ProteinID:
XP_057433561
LinkDB
All DBs
Position
6:65489980..65492670
Genome browser
AA seq
467 aa
AA seq
DB search
MYLNWLWKRGGKNSPPQPQPPPPPPETHNFSVFIPSPNIEDYYTSRQLANFPFVVIPMSS
PVKSVGAGVRNLGSTCFMSSILQCLTHTIKLFQGLRSYTHDCPGDAGEFCVFCALRSHME
SCFTPARSVVWPIFLADNLKQFSAGFKRGNQEDAQDFMNRALNKLQGCFSEGHPNLVGEI
FGGRYVSQLRCSNCGHCSETFEAIIDLSLGIENIYTIQDALESYTKVEKVGGKSTCNSCK
QVVSMEKQLLLTQTPSVAALHLKRFRGGGISVKKIENHVFFTLELDLQPYTFGAENHNVE
LKYDLYAVVVHTGNSPNSGHYFCFVRSAPDKWHKLDDSEVTRVSGDEVLCQQAYILFYAR
RGTPWFSSIIEDVNSSYPHSGSGNKGDCGGDEQIEDQHPDSNSVLGNKGDSDSAEETVDD
PIDADNECVSDLRVGDPEKNAIPHITKCHLIRRTIFKRNSYKREVEF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttaactggctttggaagcgaggaggaaagaattctccacctcaacctcagcca
cctcctccgcctcctgaaacccacaatttctccgtcttcataccttcccccaatattgaa
gattattacactagcagacagcttgccaattttcccttcgtcgtcattccaatgtcctct
cccgtcaaatcggtgggtgctggtgtgaggaatcttgggtccacgtgtttcatgagttct
attcttcagtgcctcacccacacaatcaagctgttccagggtctccgttcttacactcat
gattgcccgggtgacgcgggtgaattctgtgttttctgtgccctccgttcacacatggag
tcttgctttacacctgccagaagtgtggtttggcctatattccttgccgataatttgaaa
caattttcagctggtttcaaaagaggcaatcaggaggatgcccaagactttatgaaccgt
gccttgaataaactgcaaggttgcttttcagaaggacatcctaatcttgttggagaaatc
tttggtggtcgttatgttagccaacttcgatgtagtaactgtggtcactgttctgaaact
tttgaagcgattattgacctgagcttagggatagaaaatatctataccattcaggatgca
ctggaatcatacaccaaggtggaaaaggttggtgggaagtctacttgtaatagctgcaaa
caagttgtatccatggagaagcagcttctgttaactcaaacaccttcagttgcggcatta
catttgaagagatttaggggaggcgggatttctgttaaaaagattgaaaaccatgttttt
ttcaccctggaattagacttgcaaccttatacatttggtgctgaaaatcataatgtagag
ctgaaatatgatctatatgcagttgtggttcacactggaaattcacctaattcagggcat
tacttttgctttgttcgctctgctccagacaagtggcataagttagatgactcagaggtt
accagagtatctggagatgaagtcttgtgtcaacaagcatacatcctgttttatgcacga
cgcggaacaccatggttttcgagtattatagaggatgtaaactcatcatatccacactca
ggttcaggcaacaaaggtgattgtggtggtgatgaacaaattgaagatcaacacccagat
tcaaactcagttttaggcaacaaaggtgatagtgatagtgctgaagaaactgtggatgat
cctattgatgcagataatgaatgtgtgagtgacttgcgtgttggggatccggagaaaaat
gcgataccacacataaccaagtgccacctgattagaaggaccatattcaagagaaattca
tacaagagagaggtggaattttga
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